RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IL17RBQ9NRM6 502 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 OAZ1P54368 228 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 CNGA4Q8IV77 575 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 RAD54LQ92698 747 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 KCNB2Q92953 911 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ANKRD36BP1Q96IX9 119 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 WNK4Q96J92 1243 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ESYT2A0FGR8 921 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 KIF28PB7ZC32 967 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 PGK2P07205 417 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ASIC2Q16515 512 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 NUP58Q9BVL2 599 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 NUB1Q9Y5A7 615 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.15
PTCH1-207ENST00000429896 K7ERI5 159 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 IRF6O14896 467 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 CD19P15391 556 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 GNG11P61952 73 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 PSPC1Q8WXF1 523 aaKnown RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC127Q96BQ5 260 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 KRT83P78385 493 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 GPRASP2Q96D09 838 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 TBX3O15119 743 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 PTPREP23469 700 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 HOXA7P31268 230 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 PEX3P56589 373 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 EFCC1Q9HA90 598 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 HPS5Q9UPZ3 1129 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 LAMC2Q13753 1193 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 LRRC41Q15345 812 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 CACTINQ8WUQ7 758 aaKnown RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 PRIMPOLQ96LW4 560 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 AFDNP55196 1824 aaKnown RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 DENND3A2RUS2 1198 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 FANCCQ00597 558 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 LRMPQ12912 555 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC117Q8IWD4 279 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-207ENST00000429896 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 KLRG1Q96E93 195 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
PTCH1-207ENST00000429896 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 POTECB2RU33 542 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 E9PMD0 336 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 DDIT3P35638 169 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 RESP18Q5W5W9 173 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 MED10Q9BTT4 135 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 DGKDQ16760 1214 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 LMBR1Q8WVP7 490 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 SOCS4Q8WXH5 440 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 CBX8Q9HC52 389 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 TUFT1Q9NNX1 390 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTCH1-207ENST00000429896 V9GYY5 206 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-207ENST00000429896 KCNJ18B7U540 433 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 ACTN2P35609 894 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PRPHP41219 470 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PPFIA1Q13136 1202 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 KCNJ12Q14500 433 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 C1orf112Q9NSG2 853 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-207ENST00000429896 SLFN12LQ6IEE8 588 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 GCOM2Q9BZD3 368 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-207ENST00000429896 DYNC1I1O14576 645 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 STRNO43815 780 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PSMC4P43686 418 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 KIAA0753Q2KHM9 967 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-207ENST00000429896 CHAMP1Q96JM3 812 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PLVAPQ9BX97 442 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 C2orf40Q9H1Z8 148 aa14.13□□□□□ -0.15
PTCH1-207ENST00000429896 PIK3CAP42336 1068 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 GRAMD1CQ8IYS0 662 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 DHTKD1Q96HY7 919 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC94Q9BW85 323 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 POLR3FQ9H1D9 316 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 EMILIN3Q9NT22 766 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 PSMC2P35998 433 aaKnown RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 LIN9Q5TKA1 542 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 CATSPERGQ6ZRH7 1159 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 AKR1B15C9JRZ8 316 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 ERVK-9P63128 1117 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 ERVK-24P63145 666 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 ZBBXA8MT70 800 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 GNASQ5JWF2 1037 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 DAGLBQ8NCG7 672 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 MRRFQ96E11 262 aaKnown RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 MSTO1Q9BUK6 570 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 PCIF1Q9H4Z3 704 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 CGNQ9P2M7 1197 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms