RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 HNRNPLLQ8WVV9 542 aaKnown RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 CUEDC2Q9H467 287 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 EMILIN3Q9NT22 766 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 RAB21Q9UL25 225 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 FLT1P17948 1338 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 PALM3A6NDB9 673 aaPredicted RBP8.84□□□□□ -1
HPS4-205ENST00000429411 PPEF1O14829 653 aaPredicted RBP8.84□□□□□ -1
HPS4-205ENST00000429411 SSR1P43307 286 aaKnown RBP8.84□□□□□ -1
HPS4-205ENST00000429411 CARSP49589 748 aaKnown RBP8.84□□□□□ -1
HPS4-205ENST00000429411 CYP2J2P51589 502 aa8.84□□□□□ -1
HPS4-205ENST00000429411 SLC35G1Q2M3R5 365 aa8.84□□□□□ -1
HPS4-205ENST00000429411 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -1
HPS4-205ENST00000429411 KSR1Q8IVT5 923 aa8.84□□□□□ -1
HPS4-205ENST00000429411 ADGRF4Q8IZF3 695 aa8.84□□□□□ -1
HPS4-205ENST00000429411 PACSIN1Q9BY11 444 aa8.84□□□□□ -1
HPS4-205ENST00000429411 ZMYND12Q9H0C1 365 aa8.84□□□□□ -1
HPS4-205ENST00000429411 STIM2Q9P246 746 aa8.84□□□□□ -1
HPS4-205ENST00000429411 ARMCX3Q9UH62 379 aaPredicted RBP8.84□□□□□ -1
HPS4-205ENST00000429411 SERPINB13Q9UIV8 391 aa8.84□□□□□ -1
HPS4-205ENST00000429411 BTAF1O14981 1849 aa8.83□□□□□ -1
HPS4-205ENST00000429411 COL1A1P02452 1464 aaPredicted RBP8.83□□□□□ -1
HPS4-205ENST00000429411 SIPA1L3O60292 1781 aaPredicted RBP8.83□□□□□ -1
HPS4-205ENST00000429411 PPFIA1Q13136 1202 aa8.83□□□□□ -1
HPS4-205ENST00000429411 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
HPS4-205ENST00000429411 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
HPS4-205ENST00000429411 LRRC31Q6UY01 552 aa8.83□□□□□ -1
HPS4-205ENST00000429411 DNAJC14Q6Y2X3 702 aaPredicted RBP8.83□□□□□ -1
HPS4-205ENST00000429411 PEX26Q7Z412 305 aa8.83□□□□□ -1
HPS4-205ENST00000429411 DAAM2Q86T65 1068 aa8.83□□□□□ -1
HPS4-205ENST00000429411 DDX42Q86XP3 938 aaKnown RBP eCLIP8.83□□□□□ -1
HPS4-205ENST00000429411 OTUD6BQ8N6M0 293 aa8.83□□□□□ -1
HPS4-205ENST00000429411 NEDD1Q8NHV4 660 aa8.83□□□□□ -1
HPS4-205ENST00000429411 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
HPS4-205ENST00000429411 RAD54LQ92698 747 aa8.83□□□□□ -1
HPS4-205ENST00000429411 MTMR8Q96EF0 704 aa8.83□□□□□ -1
HPS4-205ENST00000429411 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
HPS4-205ENST00000429411 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
HPS4-205ENST00000429411 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
HPS4-205ENST00000429411 E7EVH7 732 aa8.83□□□□□ -1
HPS4-205ENST00000429411 ZNF263O14978 683 aa8.83□□□□□ -1
HPS4-205ENST00000429411 FAM13AO94988 1023 aa8.83□□□□□ -1
HPS4-205ENST00000429411 PDHBP11177 359 aa8.83□□□□□ -1
HPS4-205ENST00000429411 NPR1P16066 1061 aa8.83□□□□□ -1
HPS4-205ENST00000429411 KLRC1P26715 233 aa8.83□□□□□ -1
HPS4-205ENST00000429411 ALDH1B1P30837 517 aa8.83□□□□□ -1
HPS4-205ENST00000429411 PPP1R2P41236 205 aa8.83□□□□□ -1
HPS4-205ENST00000429411 AMPD2Q01433 879 aa8.83□□□□□ -1
HPS4-205ENST00000429411 NNTQ13423 1086 aa8.83□□□□□ -1
HPS4-205ENST00000429411 CCDC25Q86WR0 208 aa8.83□□□□□ -1
HPS4-205ENST00000429411 MYCT1Q8N699 235 aa8.83□□□□□ -1
HPS4-205ENST00000429411 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
HPS4-205ENST00000429411 SH2D4AQ9H788 454 aa8.83□□□□□ -1
HPS4-205ENST00000429411 DNM3Q9UQ16 869 aa8.83□□□□□ -1
HPS4-205ENST00000429411 AKAP11Q9UKA4 1901 aa8.83□□□□□ -1
HPS4-205ENST00000429411 PARP4Q9UKK3 1724 aaKnown RBP8.82□□□□□ -1
HPS4-205ENST00000429411 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
HPS4-205ENST00000429411 LRRN2O75325 713 aa8.82□□□□□ -1
HPS4-205ENST00000429411 GFPT2O94808 682 aa8.82□□□□□ -1
HPS4-205ENST00000429411 MYL1P05976 194 aa8.82□□□□□ -1
HPS4-205ENST00000429411 XRCC5P13010 732 aaKnown RBP8.82□□□□□ -1
HPS4-205ENST00000429411 RHBDL3P58872 404 aa8.82□□□□□ -1
HPS4-205ENST00000429411 TNNC1P63316 161 aa8.82□□□□□ -1
HPS4-205ENST00000429411 ZNF280DQ6N043 979 aa8.82□□□□□ -1
HPS4-205ENST00000429411 CCDC174Q6PII3 467 aa8.82□□□□□ -1
HPS4-205ENST00000429411 OR2W6PQ8NHA6 318 aa8.82□□□□□ -1
HPS4-205ENST00000429411 ERMNQ8TAM6 284 aa8.82□□□□□ -1
HPS4-205ENST00000429411 ARL8AQ96BM9 186 aa8.82□□□□□ -1
HPS4-205ENST00000429411 C7orf25Q9BPX7 421 aa8.82□□□□□ -1
HPS4-205ENST00000429411 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
HPS4-205ENST00000429411 RRAGCQ9HB90 399 aa8.82□□□□□ -1
HPS4-205ENST00000429411 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
HPS4-205ENST00000429411 MYH10P35580 1976 aa8.82□□□□□ -1
HPS4-205ENST00000429411 SLC9A1P19634 815 aa8.82□□□□□ -1
HPS4-205ENST00000429411 GTF2A1P52655 376 aaPredicted RBP8.82□□□□□ -1
HPS4-205ENST00000429411 KCNH2Q12809 1159 aa8.82□□□□□ -1
HPS4-205ENST00000429411 PAK2Q13177 524 aa8.82□□□□□ -1
HPS4-205ENST00000429411 SH2D3AQ9BRG2 576 aa8.82□□□□□ -1
HPS4-205ENST00000429411 DDX47Q9H0S4 455 aaKnown RBP8.82□□□□□ -1
HPS4-205ENST00000429411 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
HPS4-205ENST00000429411 STK17AQ9UEE5 414 aa8.82□□□□□ -1
HPS4-205ENST00000429411 PLAGL2Q9UPG8 496 aa8.82□□□□□ -1
HPS4-205ENST00000429411 A0A087X0T9 212 aa8.82□□□□□ -1
HPS4-205ENST00000429411 KRIT1O00522 736 aa8.82□□□□□ -1
HPS4-205ENST00000429411 TTLL1O95922 423 aa8.82□□□□□ -1
HPS4-205ENST00000429411 FAM228BP0C875 321 aa8.82□□□□□ -1
HPS4-205ENST00000429411 INPP5BP32019 993 aa8.82□□□□□ -1
HPS4-205ENST00000429411 EPHB4P54760 987 aa8.82□□□□□ -1
HPS4-205ENST00000429411 TGFB2P61812 414 aa8.82□□□□□ -1
HPS4-205ENST00000429411 GUCY1A3Q02108 690 aa8.82□□□□□ -1
HPS4-205ENST00000429411 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
HPS4-205ENST00000429411 MIIPQ5JXC2 388 aa8.82□□□□□ -1
HPS4-205ENST00000429411 GJB7Q6PEY0 223 aa8.82□□□□□ -1
HPS4-205ENST00000429411 GUF1Q8N442 669 aaKnown RBP8.82□□□□□ -1
HPS4-205ENST00000429411 SELENOSQ9BQE4 189 aa8.82□□□□□ -1
HPS4-205ENST00000429411 BLOC1S4Q9NUP1 217 aa8.82□□□□□ -1
HPS4-205ENST00000429411 ANO9A1A5B4 782 aa8.81□□□□□ -1
HPS4-205ENST00000429411 PPFIA4O75335 1185 aa8.81□□□□□ -1
HPS4-205ENST00000429411 CTNNA1P35221 906 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 SLFN13Q68D06 897 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SFR1Q86XK3 245 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms