RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MMS22LQ6ZRQ5 1243 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 NLRP14Q86W24 1093 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 GLYCTKQ8IVS8 523 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 SCFD1Q8WVM8 642 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 CABS1Q96KC9 395 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 PCDHAC2Q9Y5I4 1007 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 MED24O75448 989 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 MYL1P05976 194 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 HSD17B3P37058 310 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 SLC18A3Q16572 532 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
CDH3-202ENST00000429102 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 HAS1Q92839 578 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 PTPN22Q9Y2R2 807 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 PPP1R11O60927 126 aaPredicted RBP13.65□□□□□ -0.22
CDH3-202ENST00000429102 PPP1R37O75864 691 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 FGGP02679 453 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 CDR1P51861 262 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 PLTPP55058 493 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 GSTO1P78417 241 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 LRRC63Q05C16 580 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
CDH3-202ENST00000429102 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 JMJD4Q9H9V9 463 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 LRP6O75581 1613 aa13.65□□□□□ -0.22
CDH3-202ENST00000429102 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 ALS2CLQ60I27 953 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 NEDD1Q8NHV4 660 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 ANKS1AQ92625 1134 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 TBC1D31Q96DN5 1066 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 CEP72Q9P209 647 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 SNX24Q9Y343 169 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 EIF4E1BA6NMX2 242 aaKnown RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 GDF11O95390 407 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 QPCTQ16769 361 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 TPH2Q8IWU9 490 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 NOC2LQ9Y3T9 749 aaKnown RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 NAB2Q15742 525 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 CUL5Q93034 780 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 NGLY1Q96IV0 654 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 ATP6V1G3Q96LB4 118 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 RTFDC1Q9BY42 306 aaPredicted RBP13.64□□□□□ -0.23
CDH3-202ENST00000429102 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
CDH3-202ENST00000429102 RPSAP08865 295 aaKnown RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 USP38Q8NB14 1042 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 NYXQ9GZU5 481 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 GCNT4Q9P109 453 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 EDIL3O43854 480 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 UCHL3P15374 230 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 NMT1P30419 496 aaKnown RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 MDH1P40925 334 aaKnown RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 MYCBPAPQ8TBZ2 947 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 STK17AQ9UEE5 414 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 FOXO6A8MYZ6 492 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 KIF4AO95239 1232 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 VPS41P49754 854 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 COG2Q14746 738 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 KCNV1Q6PIU1 500 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 IQCKQ8N0W5 287 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
CDH3-202ENST00000429102 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
CDH3-202ENST00000429102 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
CDH3-202ENST00000429102 AKAP3O75969 853 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 PTGISQ16647 500 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 SPRED3Q2MJR0 410 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 GIMAP7Q8NHV1 300 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
CDH3-202ENST00000429102 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms