RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 ERAP1Q9NZ08 941 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 ZNF215Q9UL58 517 aaPredicted RBP12.19□□□□□ -0.46
ATG4B-210ENST00000428861 BTBD18B2RXH4 712 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 FGBP02675 491 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 INSRRP14616 1297 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 THPOP40225 353 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 STAT5BP51692 787 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 GUCY1B3Q02153 619 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
ATG4B-210ENST00000428861 GRIK4Q16099 956 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 LETM2Q2VYF4 491 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 KRT40Q6A162 431 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 KRT25Q7Z3Z0 450 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 ETNPPLQ8TBG4 499 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 WASF1Q92558 559 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 TANC1Q9C0D5 1861 aa12.18□□□□□ -0.46
ATG4B-210ENST00000428861 NRCAMQ92823 1304 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-210ENST00000428861 PSMD10O75832 226 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 MMP1P03956 469 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 XBP1P17861 261 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 KRT2P35908 639 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 PBX2P40425 430 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 IGBP1P78318 339 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-210ENST00000428861 SWSAP1Q6NVH7 229 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
ATG4B-210ENST00000428861 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-210ENST00000428861 LLPHQ9BRT6 129 aaKnown RBP12.17□□□□□ -0.46
ATG4B-210ENST00000428861 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
ATG4B-210ENST00000428861 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 BACH1O14867 736 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 CHMP2AO43633 222 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 CXCL10P02778 98 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 CTSHP09668 335 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 RFC2P35250 354 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 SMAD3P84022 425 aaKnown RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 UGCGQ16739 394 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 MOXD1Q6UVY6 613 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 CCDC155Q8N6L0 562 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 HAS1Q92839 578 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 AZI2Q9H6S1 392 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 ZNF302Q9NR11 478 aa12.16□□□□□ -0.46
ATG4B-210ENST00000428861 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 MAFBQ9Y5Q3 323 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-210ENST00000428861 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 RSPH10B2B2RC85 870 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 ZNF862O60290 1169 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 GAS7O60861 476 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 CHRNA1P02708 482 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 PFKMP08237 780 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 RSPH10BP0C881 870 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 GNAT1P11488 350 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 RABGGTBP53611 331 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 KRT76Q01546 638 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 MGAT3Q09327 533 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 LRCH2Q5VUJ6 765 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 PPP4R3AQ6IN85 833 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 POTEDQ86YR6 584 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 SMAP1Q8IYB5 467 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 ATP8B4Q8TF62 1192 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 DNAJB3Q8WWF6 145 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 FAM161BQ96MY7 647 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 RIT2Q99578 217 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 PBX4Q9BYU1 374 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 UPF2Q9HAU5 1272 aaKnown RBP12.15□□□□□ -0.46
ATG4B-210ENST00000428861 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 VAV3Q9UKW4 847 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
ATG4B-210ENST00000428861 IGSF9BQ9UPX0 1349 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 WDR64B1ANS9 1081 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
ATG4B-210ENST00000428861 EML1O00423 815 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms