RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 TTC14Q96N46 770 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 NEDD4P46934 1319 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 TGFB3P10600 412 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 ASTLQ6HA08 431 aaPredicted RBP13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 TSHZ1Q6ZSZ6 1077 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 DNAJB3Q8WWF6 145 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 RMDN1Q96DB5 314 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 GPR20Q99678 358 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 AGO3Q9H9G7 860 aaKnown RBP13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 KMT2BQ9UMN6 2715 aaPredicted RBP13.48□□□□□ -0.25
ALMS1P1-201ENST00000428767 C2CD4DB7Z1M9 353 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 ASGR2P07307 311 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 ERVFC1P60507 584 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 ANKRD54Q6NXT1 300 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 RSPH3Q86UC2 560 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 RTN4RL1Q86UN2 441 aaPredicted RBP13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 UBALD2Q8IYN6 164 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 AMNQ9BXJ7 453 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 S1PR5Q9H228 398 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 KAT14Q9H8E8 782 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 CEP250Q9BV73 2442 aa13.47□□□□□ -0.25
ALMS1P1-201ENST00000428767 NRCAMQ92823 1304 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 ARP10275 920 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 SCG2P13521 617 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 MARK3P27448 753 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 SYCE2Q6PIF2 218 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 FLCNQ8NFG4 579 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 ZBTB10Q96DT7 871 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 TUBE1Q9UJT0 475 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 LRFN2Q9ULH4 789 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
ALMS1P1-201ENST00000428767 A0A0D9SFI3 127 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 FGF18O76093 207 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 STAG3L1P0CL83 205 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 IGBP1P78318 339 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 GHRHRQ02643 423 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 SEMA3FQ13275 785 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 NEDD9Q14511 834 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 GNPTABQ3T906 1256 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 CRIPAKQ8N1N5 446 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 ESR2Q92731 530 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 POMKQ9H5K3 350 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 CACNA1GO43497 2377 aa13.45□□□□□ -0.26
ALMS1P1-201ENST00000428767 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 UBE3AQ05086 875 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 GRIK4Q16099 956 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 CWF19L1Q69YN2 538 aaKnown RBP13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 HOMER1Q86YM7 354 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 CNTNAP3BQ96NU0 1288 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 CNTNAP3Q9BZ76 1288 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 ENTPD7Q9NQZ7 604 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 PADI3Q9ULW8 664 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
ALMS1P1-201ENST00000428767 ZFHX4Q86UP3 3567 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms