RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ARP10275 920 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRIM39-209ENST00000428728 HTRA4P83105 476 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-209ENST00000428728 AAK1Q2M2I8 961 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 TAF2Q6P1X5 1199 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 FBXO22Q8NEZ5 403 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 DNAJB3Q8WWF6 145 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 APBB2Q92870 758 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 ZBTB10Q96DT7 871 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 JAKMIP1Q96N16 626 aaKnown RBP19.51■□□□□ 0.71
TRIM39-209ENST00000428728 PCYT2Q99447 389 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 SDF4Q9BRK5 362 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 BARHL2Q9NY43 387 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 TRPC6Q9Y210 931 aa19.51■□□□□ 0.71
TRIM39-209ENST00000428728 FOSP01100 380 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-209ENST00000428728 RSPH3Q86UC2 560 aa19.5■□□□□ 0.71
TRIM39-209ENST00000428728 SP7Q8TDD2 431 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-209ENST00000428728 AZI2Q9H6S1 392 aa19.5■□□□□ 0.71
TRIM39-209ENST00000428728 TTC3P53804 2025 aa19.5■□□□□ 0.71
TRIM39-209ENST00000428728 NFASCO94856 1347 aa19.5■□□□□ 0.71
TRIM39-209ENST00000428728 DDX39AO00148 427 aaKnown RBP19.49■□□□□ 0.71
TRIM39-209ENST00000428728 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
TRIM39-209ENST00000428728 ZNF76P36508 570 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 SREBF1P36956 1147 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 RCAN1P53805 252 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 ACTR2P61160 394 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 MGAT3Q09327 533 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 ITGB3BPQ13352 177 aaPredicted RBP19.49■□□□□ 0.71
TRIM39-209ENST00000428728 AP3B2Q13367 1082 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 CEP55Q53EZ4 464 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 MARCH8Q5T0T0 291 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 Q6ZUG5 572 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 TRAPPC12Q8WVT3 735 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 BRF1Q92994 677 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 TOP1MTQ969P6 601 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 FAM49AQ9H0Q0 323 aaPredicted RBP19.49■□□□□ 0.71
TRIM39-209ENST00000428728 AGO4Q9HCK5 861 aaKnown RBP19.49■□□□□ 0.71
TRIM39-209ENST00000428728 COG5Q9UP83 839 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 SNX14Q9Y5W7 946 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 CDY2AQ9Y6F7 541 aa19.49■□□□□ 0.71
TRIM39-209ENST00000428728 MBLAC1A4D2B0 266 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-209ENST00000428728 BMP1P13497 986 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 SCG2P13521 617 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 INSRRP14616 1297 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 CLK2P49760 499 aaKnown RBP19.48■□□□□ 0.71
TRIM39-209ENST00000428728 LPIN1Q14693 890 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 JAKMIP3Q5VZ66 844 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 BLOC1S2Q6QNY1 142 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 RPAINQ86UA6 219 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 HLA-CQ95604 372 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 LMCD1Q9NZU5 365 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 NCOR1O75376 2440 aa19.48■□□□□ 0.71
TRIM39-209ENST00000428728 MRPS6P82932 125 aaKnown RBP19.47■□□□□ 0.71
TRIM39-209ENST00000428728 PLCB4Q15147 1175 aa19.47■□□□□ 0.71
TRIM39-209ENST00000428728 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
TRIM39-209ENST00000428728 TEX2Q8IWB9 1127 aa19.47■□□□□ 0.71
TRIM39-209ENST00000428728 UIMC1Q96RL1 719 aa19.47■□□□□ 0.71
TRIM39-209ENST00000428728 GLT8D2Q9H1C3 349 aa19.47■□□□□ 0.71
TRIM39-209ENST00000428728 NID2Q14112 1375 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 MUC3AQ02505 3323 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 RRN3P2A6NIE6 340 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 PPFIA3O75145 1194 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 HSPA4P34932 840 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 TMEM62Q0P6H9 643 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 EPC2Q52LR7 807 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 FBXO47Q5MNV8 452 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 KCNB2Q92953 911 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 XIRP2A4UGR9 3374 aa19.46■□□□□ 0.71
TRIM39-209ENST00000428728 MEIS1O00470 390 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 ADAMTS3O15072 1205 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 RPS6KB1P23443 525 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 STAT5BP51692 787 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 TSHZ1Q6ZSZ6 1077 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 PLA2G4DQ86XP0 818 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 PHKBQ93100 1093 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 SAMD11Q96NU1 681 aa19.45■□□□□ 0.7
TRIM39-209ENST00000428728 POTEB3A0JP26 581 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 FAM86B1E9PN63 330 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 M0QZ92 97 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 BACH1O14867 736 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 CCNE2O96020 404 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 FAM86B2P0C5J1 330 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 CD52P31358 61 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 POTEBQ6S5H4 581 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 NIPA1Q7RTP0 329 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 PLPPR4Q7Z2D5 763 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 TMEM192Q8IY95 271 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 REXO1Q8N1G1 1221 aaKnown RBP19.44■□□□□ 0.7
TRIM39-209ENST00000428728 TRPV2Q9Y5S1 764 aa19.44■□□□□ 0.7
TRIM39-209ENST00000428728 ESYT2A0FGR8 921 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 REC8O95072 547 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 CTNNB1P35222 781 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 GPM6BQ13491 265 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 PKN1Q16512 942 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 CCDC60Q8IWA6 550 aaPredicted RBP19.43■□□□□ 0.7
TRIM39-209ENST00000428728 FIBCD1Q8N539 461 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 RASGRP4Q8TDF6 673 aa19.43■□□□□ 0.7
TRIM39-209ENST00000428728 CCDC12Q8WUD4 166 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms