RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
VARS-216ENST00000428445 TRAPPC12Q8WVT3 735 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 LINC01599Q8WXQ3 324 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 PABPC5Q96DU9 382 aaKnown RBP18.99■□□□□ 0.63
VARS-216ENST00000428445 LZTS2Q9BRK4 669 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 ERAP1Q9NZ08 941 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 HCN4Q9Y3Q4 1203 aa18.99■□□□□ 0.63
VARS-216ENST00000428445 TTC3P53804 2025 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 POTEB3A0JP26 581 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 INSRRP14616 1297 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 CD52P31358 61 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 BMPR1AP36894 532 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 GNAQP50148 359 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 POTEBQ6S5H4 581 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 HEATR3Q7Z4Q2 680 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 RPAINQ86UA6 219 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 SKAP1Q86WV1 359 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 IGFLR1Q9H665 355 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 RC3H2Q9HBD1 1191 aaKnown RBP18.98■□□□□ 0.63
VARS-216ENST00000428445 JADE2Q9NQC1 790 aa18.98■□□□□ 0.63
VARS-216ENST00000428445 MBLAC1A4D2B0 266 aaPredicted RBP18.97■□□□□ 0.63
VARS-216ENST00000428445 IBSPP21815 317 aaPredicted RBP18.97■□□□□ 0.63
VARS-216ENST00000428445 HYAL1Q12794 435 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 CREB3L3Q68CJ9 461 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 TYW1BQ6NUM6 668 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 TAF2Q6P1X5 1199 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 FANCBQ8NB91 859 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 ZNF689Q96CS4 500 aaPredicted RBP18.97■□□□□ 0.63
VARS-216ENST00000428445 TMEM87BQ96K49 555 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 UIMC1Q96RL1 719 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 SMARCAD1Q9H4L7 1026 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 ALG13Q9NP73 1137 aaKnown RBP18.97■□□□□ 0.63
VARS-216ENST00000428445 SLC12A7Q9Y666 1083 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 ADGRA3Q8IWK6 1321 aa18.97■□□□□ 0.63
VARS-216ENST00000428445 SPDYE3A6NKU9 549 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 LINC01565O15544 149 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 ARP10275 920 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 BTG3Q14201 252 aaPredicted RBP18.96■□□□□ 0.63
VARS-216ENST00000428445 TMTC3Q6ZXV5 915 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 RSPH3Q86UC2 560 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 TMTC2Q8N394 836 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 CDHR1Q96JP9 859 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 TCEANC2Q96MN5 208 aa18.96■□□□□ 0.63
VARS-216ENST00000428445 C5orf67F2Z3F1 127 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 DGKIO75912 1065 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 LIFRP42702 1097 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 GATMP50440 423 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 MRPS6P82932 125 aaKnown RBP18.95■□□□□ 0.62
VARS-216ENST00000428445 CAMK1Q14012 370 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 COL19A1Q14993 1142 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 NECTIN1Q15223 517 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 PAN2Q504Q3 1202 aaKnown RBP18.95■□□□□ 0.62
VARS-216ENST00000428445 WWC2Q6AWC2 1192 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 MXRA8Q9BRK3 442 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 ESYT1Q9BSJ8 1104 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 MTA3Q9BTC8 594 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 KCNH7Q9NS40 1196 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 TMEM260Q9NX78 707 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 KIAA1671Q9BY89 1806 aa18.95■□□□□ 0.62
VARS-216ENST00000428445 RB1P06400 928 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 CALM1P0DP23 149 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 CALM2P0DP24 149 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 CALM3P0DP25 149 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 DNAJB1P25685 340 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
VARS-216ENST00000428445 ZP2Q05996 745 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 PLCB4Q15147 1175 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 TSHZ1Q6ZSZ6 1077 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 CLP1Q92989 425 aaKnown RBP18.94■□□□□ 0.62
VARS-216ENST00000428445 JPH1Q9HDC5 661 aaPredicted RBP18.94■□□□□ 0.62
VARS-216ENST00000428445 SLC9A2Q9UBY0 812 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 TRPC6Q9Y210 931 aa18.94■□□□□ 0.62
VARS-216ENST00000428445 MRPL42Q9Y6G3 142 aaKnown RBP18.94■□□□□ 0.62
VARS-216ENST00000428445 ACTR2P61160 394 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 ITGB3BPQ13352 177 aaPredicted RBP18.93■□□□□ 0.62
VARS-216ENST00000428445 TMEM266Q2M3C6 531 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 CTC1Q2NKJ3 1217 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 PUS10Q3MIT2 529 aaKnown RBP18.93■□□□□ 0.62
VARS-216ENST00000428445 C11orf84Q9BUA3 381 aaPredicted RBP18.93■□□□□ 0.62
VARS-216ENST00000428445 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 PADI3Q9ULW8 664 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 PLAGL2Q9UPG8 496 aa18.93■□□□□ 0.62
VARS-216ENST00000428445 EVPLQ92817 2033 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 RRN3P2A6NIE6 340 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 DDX39AO00148 427 aaKnown RBP18.92■□□□□ 0.62
VARS-216ENST00000428445 TBX10O75333 385 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 IRS1P35568 1242 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 ADGRD2Q7Z7M1 963 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 CRIPAKQ8N1N5 446 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 TMX1Q9H3N1 280 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 AZI2Q9H6S1 392 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 CDHR5Q9HBB8 845 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 PCDHGC5Q9Y5F6 944 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 TRPV2Q9Y5S1 764 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 V9GY48 417 aaPredicted RBP18.92■□□□□ 0.62
VARS-216ENST00000428445 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
VARS-216ENST00000428445 PRR33A8MZF0 331 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms