RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 MBLAC1A4D2B0 266 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 TNFRSF10AO00220 468 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 RFXAPO00287 272 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 NEFLP07196 543 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 CDC27P30260 824 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 CLK2P49760 499 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 MKRN4PQ13434 485 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 TYW1BQ6NUM6 668 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 BRF1Q92994 677 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 TOP1MTQ969P6 601 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 SQORQ9Y6N5 450 aa17.62■□□□□ 0.41
CTDSP1-202ENST00000428361 EPOPA6NHQ4 379 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 MEIS1O00470 390 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 STAT5BP51692 787 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 ACTR2P61160 394 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 PTPROQ16827 1216 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 TCTN1Q2MV58 587 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 TMCO2Q7Z6W1 182 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 REXO1Q8N1G1 1221 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 FBXO22Q8NEZ5 403 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 ZMYND12Q9H0C1 365 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 FAM217BQ9NTX9 383 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
CTDSP1-202ENST00000428361 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 ARHGEF15O94989 841 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 CYP3A4P08684 503 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 TSHZ1Q6ZSZ6 1077 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 ADAMTS19Q8TE59 1207 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 HLA-CQ95604 372 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 UHRF1Q96T88 793 aaPredicted RBP17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 AGXT2Q9BYV1 514 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 SUGCTQ9HAC7 445 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 RWDD3Q9Y3V2 267 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 COL4A6Q14031 1691 aa17.6■□□□□ 0.41
CTDSP1-202ENST00000428361 BACH1O14867 736 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 CHRNA1P02708 482 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 GHRP10912 638 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 INSRRP14616 1297 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 IGBP1P78318 339 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 MRPS6P82932 125 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 PLA2G4DQ86XP0 818 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 NME8Q8N427 588 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 GDPD5Q8WTR4 605 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 DNAJB3Q8WWF6 145 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 PCDHA2Q9Y5H9 948 aa17.59■□□□□ 0.41
CTDSP1-202ENST00000428361 SIP14410 1827 aa17.58■□□□□ 0.41
CTDSP1-202ENST00000428361 COL1A2P08123 1366 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 HBP1O60381 514 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 LPXNO60711 386 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 UPP2O95045 317 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 ATG7O95352 703 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 ARP10275 920 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 MGAT3Q09327 533 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 FBXO47Q5MNV8 452 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 ODR4Q5SWX8 454 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 JAKMIP3Q5VZ66 844 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 CPLX2Q6PUV4 134 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 RUFY4Q6ZNE9 571 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 IL17RAQ96F46 866 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 C22orf23Q9BZE7 217 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 CDY2AQ9Y6F7 541 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 NCOR1O75376 2440 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 COL4A4P53420 1690 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 TRANK1O15050 2925 aa17.58■□□□□ 0.4
CTDSP1-202ENST00000428361 SMIM35A0A1B0GVV1 85 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 IPO5O00410 1097 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 IFNAR1P17181 557 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 ITGB3BPQ13352 177 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 LPIN1Q14693 890 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 PLCB4Q15147 1175 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 TIGD5Q53EQ6 642 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 MARCH8Q5T0T0 291 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 PCYT2Q99447 389 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF577Q9BSK1 485 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 FAM49AQ9H0Q0 323 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms