RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 GALNT17Q6IS24 598 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 PSRC1Q6PGN9 363 aaPredicted RBP10.07□□□□□ -0.8
LINC00963-204ENST00000427778 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 SNX27Q96L92 541 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 NECAB3Q96P71 396 aaPredicted RBP10.07□□□□□ -0.8
LINC00963-204ENST00000427778 LRFN3Q9BTN0 628 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 KCNH7Q9NS40 1196 aa10.07□□□□□ -0.8
LINC00963-204ENST00000427778 H3BRB1 525 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 ARHGAP33O14559 1287 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 PFKMP08237 780 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 CSF2RAP15509 400 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 CIITAP33076 1130 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 RFC2P35250 354 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 NPY5RQ15761 445 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 PTGISQ16647 500 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
LINC00963-204ENST00000427778 C16orf59Q7L2K0 433 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 C7orf31Q8N865 590 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 CAGE1Q8TC20 777 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 GTF3C6Q969F1 213 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
LINC00963-204ENST00000427778 PRDM12Q9H4Q4 367 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 TUT1Q9H6E5 874 aaKnown RBP10.06□□□□□ -0.8
LINC00963-204ENST00000427778 IL23AQ9NPF7 189 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 TMEM260Q9NX78 707 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 VPS54Q9P1Q0 977 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 HDAC6Q9UBN7 1215 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 ZNF215Q9UL58 517 aaPredicted RBP10.06□□□□□ -0.8
LINC00963-204ENST00000427778 PCDHGA4Q9Y5G9 962 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 UMODL1Q5DID0 1318 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 EMSYQ7Z589 1322 aa10.06□□□□□ -0.8
LINC00963-204ENST00000427778 COL4A4P53420 1690 aaPredicted RBP10.06□□□□□ -0.8
LINC00963-204ENST00000427778 SIP14410 1827 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 FAM86B1E9PN63 330 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 M0R2N6 131 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 ADAMTS3O15072 1205 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 CYP2C9P11712 490 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 NEK4P51957 841 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 SETQ01105 290 aaPredicted RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 STK3Q13188 491 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 PTK7Q13308 1070 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 BFSP2Q13515 415 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 CCDC85BQ15834 202 aaPredicted RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 TMEM240Q5SV17 173 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 JAKMIP3Q5VZ66 844 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 SERINC5Q86VE9 423 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 PGBD1Q96JS3 809 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 KIF2CQ99661 725 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 AGO4Q9HCK5 861 aaKnown RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
LINC00963-204ENST00000427778 PCDHA4Q9UN74 947 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
LINC00963-204ENST00000427778 GSTTP1A0A1W2PQM5 241 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 CAND2O75155 1236 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 LGR5O75473 907 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 CTDNEP1O95476 244 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 TCF7P36402 384 aaPredicted RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 USP11P51784 963 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 ADAM17P78536 824 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 ITGB3BPQ13352 177 aaPredicted RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 ME3Q16798 604 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 TMEM31Q5JXX7 168 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 SEPT1Q8WYJ6 367 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 HERVK_113Q902F9 699 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 LENG9Q96B70 501 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 SDF4Q9BRK5 362 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 CXXC1Q9P0U4 656 aaPredicted RBP10.04□□□□□ -0.8
LINC00963-204ENST00000427778 SLC9A2Q9UBY0 812 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 NOD1Q9Y239 953 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
LINC00963-204ENST00000427778 IGKV6D-21A0A0A0MT36 114 aa10.03□□□□□ -0.8
LINC00963-204ENST00000427778 IPO5O00410 1097 aaKnown RBP10.03□□□□□ -0.8
LINC00963-204ENST00000427778 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
LINC00963-204ENST00000427778 EDIL3O43854 480 aa10.03□□□□□ -0.8
LINC00963-204ENST00000427778 SORBS3O60504 671 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms