RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 OTUD5Q96G74 571 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 Q9H521 79 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PALD1Q9ULE6 856 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 ARHGAP10A1A4S6 786 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 RSPH10B2B2RC85 870 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 RSPH10BP0C881 870 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 NAT1P18440 290 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 TAC1P20366 129 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 FBLN1P23142 703 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ADCY1Q08828 1119 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PDAP1Q13442 181 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 NOLC1Q14978 699 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERC4-206ENST00000427635 ARMC3Q5W041 872 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 KCTD1Q719H9 257 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 VSIG1Q86XK7 387 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 TRIM42Q8IWZ5 723 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PDCD7Q8N8D1 485 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 SNRNP27Q8WVK2 155 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 FEM1BQ9UK73 627 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 UBN2Q6ZU65 1347 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ARHGAP42A6NI28 874 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SUPT3HB4E1H0 165 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PRRG1O14668 218 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ALDH1A2O94788 518 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 UPP2O95045 317 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MYL1P05976 194 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 HPDP32754 393 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 RASSF2P50749 326 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PPP2R5EQ16537 467 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 C8orf58Q8NAV2 365 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PNMA1Q8ND90 353 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SLF1Q9BQI6 1058 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 NDEL1Q9GZM8 345 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ENTPD7Q9NQZ7 604 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 NXF1Q9UBU9 619 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 FAM50BQ9Y247 325 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ZHX2Q9Y6X8 837 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SYNDIG1LA6NDD5 238 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 H0YC42 278 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 TADA2AO75478 443 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 JAK3P52333 1124 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 DNM1Q05193 864 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 CFAP221Q4G0U5 840 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SYTL3Q4VX76 610 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SLC27A3Q5K4L6 730 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 THEMIS2Q5TEJ8 643 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 KLHL7Q8IXQ5 586 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 CCHCR1Q8TD31 782 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 GDAP1L1Q96MZ0 367 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 OXCT2Q9BYC2 517 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 TRIM54Q9BYV2 358 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 BACH2Q9BYV9 841 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MAGEB5Q9BZ81 275 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 SP110Q9HB58 689 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PRDM4Q9UKN5 801 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ASNSP08243 561 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 INHBAP08476 426 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 RARBP10826 455 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 MAGEA1P43355 309 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 YWHAGP61981 247 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERC4-206ENST00000427635 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 KYAT1Q16773 422 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 PLEKHG6Q3KR16 790 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 GLE1Q53GS7 698 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 RSBN1LQ6PCB5 846 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 DARS2Q6PI48 645 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 OTUB1Q96FW1 271 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 ZFP42Q96MM3 310 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 EIF2AQ9BY44 585 aaKnown RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 VPS54Q9P1Q0 977 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
HERC4-206ENST00000427635 RSPH14Q9UHP6 348 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 JRKLQ9Y4A0 524 aa6.17□□□□□ -1.42
HERC4-206ENST00000427635 E5RI56 91 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 PRMT3O60678 531 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 APOEP02649 317 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ABCB4P21439 1286 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 TMED1Q13445 227 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SF3B3Q15393 1217 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD20A4Q4UJ75 823 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD20A8PQ5CZ79 823 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD20A2Q5SQ80 823 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD20A1Q5TYW2 823 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKS6Q68DC2 871 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 TRIM67Q6ZTA4 783 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 STKLD1Q8NE28 680 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 PPP1R13BQ96KQ4 1090 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ZFYVE16Q7Z3T8 1539 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 CCDC151A5D8V7 595 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 DNAJC8O75937 253 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 LRG1P02750 347 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 HSPD1P10809 573 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 PSMC2P35998 433 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 AK2P54819 239 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms