RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CETN3O15182 167 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 PRPF6O94906 941 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 NR2F2P24468 414 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 MARSP56192 900 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 FBXO38Q6PIJ6 1188 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 HAUS4Q9H6D7 363 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 SLC38A10Q9HBR0 1119 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 POLD4Q9HCU8 107 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 CD2APQ9Y5K6 639 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 EIF3CLB5ME19 914 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 FAM13AO94988 1023 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 GCNT3O95395 438 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 GAP43P17677 238 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 VCAM1P19320 739 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 CCDC125Q86Z20 511 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 IL31RAQ8NI17 732 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 EIF3CQ99613 913 aaKnown RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 NAPGQ99747 312 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 BCAS3Q9H6U6 928 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 PPP1R9AQ9ULJ8 1098 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 PLAGL2Q9UPG8 496 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 CTDP1Q9Y5B0 961 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 LRRC53A6NM62 1247 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 DDX39AO00148 427 aaKnown RBP15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZBTB39O15060 712 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 ITGB5P18084 799 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 MUTP22033 750 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 HOXD13P35453 343 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 R3HDM1Q15032 1099 aaKnown RBP15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 EPHA7Q15375 998 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 BMT2Q1RMZ1 405 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 MUM1L1Q5H9M0 696 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 CCDC122Q5T0U0 273 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 RRAGAQ7L523 313 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 PKD2L1Q9P0L9 805 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 TFR2Q9UP52 801 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 TRAF3IP3Q9Y228 551 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 LOXHD1Q8IVV2 1947 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZNF541Q9H0D2 1346 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 PLEKP08567 350 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 EPS15P42566 896 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 USP14P54578 494 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 C1orf186Q6ZWK4 172 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 FBXO41Q8TF61 875 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 BAP1Q92560 729 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 CCDC42Q96M95 316 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 NACC1Q96RE7 527 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 RIT2Q99578 217 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 LSM14BQ9BX40 385 aaKnown RBP15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 WRAP73Q9P2S5 460 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 CDC23Q9UJX2 597 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
APOBEC3D-202ENST00000427494 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 SFI1A8K8P3 1242 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 PDXKO00764 312 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZBED4O75132 1171 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 BCRP11274 1271 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 GHRHRQ02643 423 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 TUBB2AQ13885 445 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 MYCT1Q8N699 235 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 LXNQ9BS40 222 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 TUBB2BQ9BVA1 445 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 EDEM3Q9BZQ6 932 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 OLFML3Q9NRN5 406 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 TYW1Q9NV66 732 aaKnown RBP15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 ARHGAP20Q9P2F6 1191 aa15.43■□□□□ 0.06
APOBEC3D-202ENST00000427494 ASTN1O14525 1302 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 KRT86O43790 486 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 SPP2Q13103 211 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 SPA17Q15506 151 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 PCNX4Q63HM2 1172 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 GPIHBP1Q8IV16 184 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 SCYL3Q8IZE3 742 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 SYTL5Q8TDW5 730 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 KCNH7Q9NS40 1196 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 H2AFXP16104 143 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 EIF4A3P38919 411 aaKnown RBP15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 TKFCQ3LXA3 575 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 MIER3Q7Z3K6 550 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 FRMD5Q7Z6J6 570 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms