RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 KCND1Q9NSA2 647 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 ZBTB39O15060 712 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 P4HBP07237 508 aaKnown RBP29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 IRX3P78415 501 aaPredicted RBP29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 NLRX1Q86UT6 975 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 SFR1Q86XK3 245 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 SCFD1Q8WVM8 642 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 OPTNQ96CV9 577 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 EEF2KMTQ96G04 330 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 INPP4AQ96PE3 977 aaPredicted RBP29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 AGTPBP1Q9UPW5 1226 aa29.5■■■□□ 2.31
SH3GL3-202ENST00000427482 ATP9AO75110 1047 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 TBCAO75347 108 aaKnown RBP29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 UBXN1Q04323 297 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 LRRC55Q6ZSA7 311 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 PPFIBP1Q86W92 1011 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 TMEM139Q8IV31 216 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 ZNF507Q8TCN5 953 aa29.49■■■□□ 2.31
SH3GL3-202ENST00000427482 DOCK5Q9H7D0 1870 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 RSPH10B2B2RC85 870 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 RSPH10BP0C881 870 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 ADKP55263 362 aaKnown RBP29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 ASCC2Q9H1I8 757 aaPredicted RBP29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 KCND2Q9NZV8 630 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.48■■■□□ 2.314e-6■■■□□ 18.8
SH3GL3-202ENST00000427482 COL4A3BPQ9Y5P4 624 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 SRCAPQ6ZRS2 3230 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 AKR1B15C9JRZ8 316 aaPredicted RBP29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 MAFGO15525 162 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 GAP43P17677 238 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 RBL2Q08999 1139 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 MOGSQ13724 837 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 LDLRAD1Q5T700 205 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 CEP135Q66GS9 1140 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 ZSWIM4Q9H7M6 989 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 FBXO40Q9UH90 709 aa29.48■■■□□ 2.31
SH3GL3-202ENST00000427482 TPM2P07951 284 aa29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 PRKCSHP14314 528 aaPredicted RBP29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 MTIF2P46199 727 aaKnown RBP29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 EPM2AIP1Q7L775 607 aaPredicted RBP29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 KCTD10Q9H3F6 313 aa29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 SAMM50Q9Y512 469 aa29.47■■■□□ 2.31
SH3GL3-202ENST00000427482 A0A1W2PQC6 194 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 PEX10O60683 326 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 STAM2O75886 525 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 JAK3P52333 1124 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 HERVK_113P62684 666 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 KRT76Q01546 638 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 SPATC1LQ9H0A9 340 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 PFASO15067 1338 aa29.46■■■□□ 2.31
SH3GL3-202ENST00000427482 LYPLA2O95372 231 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 GYPCP04921 128 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 DNM2P50570 870 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 CASP5P51878 434 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 TRIM14Q14142 442 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 NELFCDQ8IXH7 590 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 CCAR2Q8N163 923 aaKnown RBP29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 PANX2Q96RD6 677 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 OLFML3Q9NRN5 406 aa29.45■■■□□ 2.31
SH3GL3-202ENST00000427482 RGS20O76081 388 aa29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 SFNP31947 248 aa29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 QARSP47897 775 aaKnown RBP29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 MIIPQ5JXC2 388 aa29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 DNTTIP2Q5QJE6 756 aaKnown RBP29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 DNERQ8NFT8 737 aa29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 IWS1Q96ST2 819 aa29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 BAG1Q99933 345 aaPredicted RBP29.45■■■□□ 2.3
SH3GL3-202ENST00000427482 USP27XA6NNY8 438 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 B4DLN1 442 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 MFAP3LO75121 409 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 CNMDO75829 334 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 FAM13AO94988 1023 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 CCNE2O96020 404 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 FKBP3Q00688 224 aaKnown RBP29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 E4F1Q66K89 784 aaPredicted RBP29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 FASTKD5Q7L8L6 764 aaKnown RBP29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 ANKRD35Q8N283 1001 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 TCEAL9Q9UHQ7 104 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 CLEC11AQ9Y240 323 aa29.44■■■□□ 2.3
SH3GL3-202ENST00000427482 ARHGEF35A5YM69 484 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 WDR64B1ANS9 1081 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 PPP4R3CPQ6ZMV5 832 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 RDM1Q8NG50 284 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 CDHR1Q96JP9 859 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 SENP7Q9BQF6 1050 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 NOC4LQ9BVI4 516 aaKnown RBP29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 DBR1Q9UK59 544 aaKnown RBP29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 ODF2LQ9ULJ1 636 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 PES1O00541 588 aaKnown RBP29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 STX10O60499 249 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 TPM1P09493 284 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 POTEJP0CG39 1038 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 KCNA2P16389 499 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 GUCY2CP25092 1073 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 CASP14P31944 242 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 BMT2Q1RMZ1 405 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 ZNF746Q6NUN9 644 aaPredicted RBP29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 CNGA4Q8IV77 575 aa29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 ZC3H3Q8IXZ2 948 aaKnown RBP29.43■■■□□ 2.3
SH3GL3-202ENST00000427482 CEP63Q96MT8 703 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms