RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CCDC103Q8IW40 242 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
C9orf3-205ENST00000427193 CCDC140Q96MF4 163 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 LRP2BPQ9P2M1 347 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 LRP5O75197 1615 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 TMEM2Q9UHN6 1383 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 AHDC1Q5TGY3 1603 aaPredicted RBP7.86□□□□□ -1.15
C9orf3-205ENST00000427193 TBX1O43435 398 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 SUSD5O60279 629 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 ITGB3P05106 788 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 ITGA1P56199 1179 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 ZXDCQ2QGD7 858 aaPredicted RBP7.86□□□□□ -1.15
C9orf3-205ENST00000427193 LARP1BQ659C4 914 aaKnown RBP7.86□□□□□ -1.15
C9orf3-205ENST00000427193 NLRP10Q86W26 655 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 FAM26EQ8N5C1 309 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 TMEM169Q96HH4 297 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 MRVI1Q9Y6F6 885 aa7.86□□□□□ -1.15
C9orf3-205ENST00000427193 NWD1Q149M9 1564 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 BCL6P41182 706 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 ECI1P42126 302 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 CHRNA2Q15822 529 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 KREMEN2Q8NCW0 462 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 PRKAG3Q9UGI9 489 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 TMEFF2Q9UIK5 374 aaPredicted RBP7.85□□□□□ -1.15
C9orf3-205ENST00000427193 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 COA3Q9Y2R0 106 aaPredicted RBP7.85□□□□□ -1.15
C9orf3-205ENST00000427193 RPRD2Q5VT52 1461 aaKnown RBP7.85□□□□□ -1.15
C9orf3-205ENST00000427193 NCOA3Q9Y6Q9 1424 aa7.85□□□□□ -1.15
C9orf3-205ENST00000427193 EFCAB6Q5THR3 1501 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 TET3O43151 1660 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 MAGEA10P43363 369 aaPredicted RBP7.84□□□□□ -1.15
C9orf3-205ENST00000427193 FXNQ16595 210 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 PRR31Q5SQ13 230 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 FAM124AQ86V42 546 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 C8orf37Q96NL8 207 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 RBM15Q96T37 977 aaKnown RBP eCLIP7.84□□□□□ -1.15
C9orf3-205ENST00000427193 MYRFQ9Y2G1 1151 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 NOS1P29475 1434 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 DIP2AQ14689 1571 aa7.84□□□□□ -1.15
C9orf3-205ENST00000427193 KDM5AP29375 1690 aaKnown RBP7.83□□□□□ -1.16
C9orf3-205ENST00000427193 MROH6A6NGR9 719 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 B2RBV5 119 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 H7BY64 318 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 ARNTLO00327 626 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 DDAH1O94760 285 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 PLATP00750 562 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 LTBRP36941 435 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 NKX3-2P78367 333 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 BORAQ6PGQ7 559 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 PPIL6Q8IXY8 311 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 LGI4Q8N135 537 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 RCBTB1Q8NDN9 531 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 GPR20Q99678 358 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 YIPF4Q9BSR8 244 aa7.83□□□□□ -1.16
C9orf3-205ENST00000427193 KCNJ6P48051 423 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 GFRA1P56159 465 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 GNL2Q13823 731 aaKnown RBP7.82□□□□□ -1.16
C9orf3-205ENST00000427193 CR1LQ2VPA4 569 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 BRINP3Q76B58 766 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 SMPD4Q9NXE4 827 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 KANK1Q14678 1352 aa7.82□□□□□ -1.16
C9orf3-205ENST00000427193 HGSO14964 777 aaPredicted RBP7.81□□□□□ -1.16
C9orf3-205ENST00000427193 ERCC5P28715 1186 aaPredicted RBP7.81□□□□□ -1.16
C9orf3-205ENST00000427193 STAT5AP42229 794 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 LSAMPQ13449 338 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 PRSS53Q2L4Q9 553 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 MCTP2Q6DN12 878 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
C9orf3-205ENST00000427193 STK32CQ86UX6 486 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 TTC9BQ8N6N2 239 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
C9orf3-205ENST00000427193 EPN3Q9H201 632 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 FBXL7Q9UJT9 491 aa7.81□□□□□ -1.16
C9orf3-205ENST00000427193 E9PCH4 1651 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 TRPM2O94759 1503 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 INSRRP14616 1297 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 YY1P25490 414 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 ADAM17P78536 824 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 ADAM9Q13443 819 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 SF1Q15637 639 aaKnown RBP7.8□□□□□ -1.16
C9orf3-205ENST00000427193 TBC1D10BQ4KMP7 808 aaPredicted RBP7.8□□□□□ -1.16
C9orf3-205ENST00000427193 EMC4Q5J8M3 183 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 EEPD1Q7L9B9 569 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 TMEM145Q8NBT3 493 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 TOE1Q96GM8 510 aaKnown RBP7.8□□□□□ -1.16
C9orf3-205ENST00000427193 CHAMP1Q96JM3 812 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 DTLQ9NZJ0 730 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
C9orf3-205ENST00000427193 CFAP65Q6ZU64 1925 aaKnown RBP7.8□□□□□ -1.16
C9orf3-205ENST00000427193 SPATA31E1Q6ZUB1 1445 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 NHSL1Q5SYE7 1610 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 DDX3XO00571 662 aaKnown RBP eCLIP7.79□□□□□ -1.16
C9orf3-205ENST00000427193 TADA3O75528 432 aa7.79□□□□□ -1.16
C9orf3-205ENST00000427193 ETFBP38117 255 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms