RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 CARMIL3Q8ND23 1372 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 PTK2BQ14289 1009 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 TTC39CQ8N584 583 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 GOLGA8IPA6NC78 632 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 NDUFA8P51970 172 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 DEAF1O75398 565 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-203ENST00000427191 PRDM1O75626 825 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 MFSD14BQ5SR56 506 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 CYP4F22Q6NT55 531 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 MMEP08473 750 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 FBXO18Q8NFZ0 1043 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 SLC39A2Q9NP94 309 aa15.5■□□□□ 0.07
PTPN13-203ENST00000427191 SOX5P35711 763 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 LRRC4Q9HBW1 653 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 SNX2O60749 519 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 SLFNL1Q499Z3 407 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 CERKLQ49MI3 558 aaPredicted RBP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 TTC19Q6DKK2 380 aaPredicted RBP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 OTUD7BQ6GQQ9 843 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 TADA2BQ86TJ2 420 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 MXD3Q9BW11 206 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 ZC3H12BQ5HYM0 836 aaKnown RBP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 CCDC127Q96BQ5 260 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 COPEO14579 308 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 SLFN14P0C7P3 912 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 IFNL3Q8IZI9 196 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 KIAA1024Q9UPX6 916 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 RWDD2BP57060 319 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 MAPKBP1O60336 1514 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
PTPN13-203ENST00000427191 SF3A3Q12874 501 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTPN13-203ENST00000427191 CDH2P19022 906 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 GOLGA8FQ08AF8 430 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 GOLGA8DPQ0D2H9 430 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 SLC12A1Q13621 1099 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ADAT2Q7Z6V5 191 aaKnown RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ENAHQ8N8S7 591 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 RNF139Q8WU17 664 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 EML4Q9HC35 981 aaKnown RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 AP3B1O00203 1094 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 GSNP06396 782 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ICA1Q05084 483 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 E2F5Q15329 346 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 TRADDQ15628 312 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 EFHBQ8N7U6 833 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 BTG4Q9NY30 223 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 CHL1O00533 1208 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 OCM2P0CE71 109 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 OCMP0CE72 109 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 BAG6P46379 1132 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 UBE3CQ15386 1083 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 RYBPQ8N488 228 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 MYL10Q9BUA6 226 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 GRID2IPA4D2P6 1211 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 KRT87PA6NCN2 255 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 CCDC22O60826 627 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 PSMA3P25788 255 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 COPS2P61201 443 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 USP28Q96RU2 1077 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ZFP69BQ9UJL9 534 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 DBNLQ9UJU6 430 aaKnown RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 BLOC1S6Q9UL45 172 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 FMNL1O95466 1100 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ESRRBO95718 433 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 KRT33BQ14525 404 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 PROM2Q8N271 834 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 TTC8Q8TAM2 541 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 SEPT9Q9UHD8 586 aaPredicted RBP15.48■□□□□ 0.07
PTPN13-203ENST00000427191 TNKSO95271 1327 aa15.48■□□□□ 0.07
PTPN13-203ENST00000427191 CALB1P05937 261 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 CCND2P30279 289 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 AP1B1Q10567 949 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 CASP8Q14790 479 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 GJA10Q969M2 543 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 EYA1Q99502 592 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 SH3GL3Q99963 347 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 PARVGQ9HBI0 331 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 KMT5AQ9NQR1 393 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 IRAK4Q9NWZ3 460 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 SENP1Q9P0U3 644 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 ASAP2O43150 1006 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 GCP02774 474 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
PTPN13-203ENST00000427191 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 MTMR6Q9Y217 621 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms