RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.56□□□□□ -1.52
LINC02541-201ENST00000427157 WNT9AO14904 365 aa5.56□□□□□ -1.52
LINC02541-201ENST00000427157 FOXS1O43638 330 aa5.56□□□□□ -1.52
LINC02541-201ENST00000427157 PTPN1P18031 435 aaKnown RBP5.56□□□□□ -1.52
LINC02541-201ENST00000427157 USP10Q14694 798 aaKnown RBP5.56□□□□□ -1.52
LINC02541-201ENST00000427157 TCTN3Q6NUS6 607 aa5.56□□□□□ -1.52
LINC02541-201ENST00000427157 MAMDC2Q7Z304 686 aaPredicted RBP5.56□□□□□ -1.52
LINC02541-201ENST00000427157 MTDHQ86UE4 582 aaKnown RBP5.56□□□□□ -1.52
LINC02541-201ENST00000427157 ZNF747Q9BV97 191 aa5.56□□□□□ -1.52
LINC02541-201ENST00000427157 VPS11Q9H270 941 aa5.56□□□□□ -1.52
LINC02541-201ENST00000427157 FAM90A27PA6NNH2 459 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 MAN2B1O00754 1011 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 AQP7O14520 342 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 PDPK1O15530 556 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 STK10O94804 968 aaKnown RBP5.55□□□□□ -1.52
LINC02541-201ENST00000427157 C6orf222P0C671 652 aaPredicted RBP5.55□□□□□ -1.52
LINC02541-201ENST00000427157 POLD1P28340 1107 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 RBM25P49756 843 aaKnown RBP5.55□□□□□ -1.52
LINC02541-201ENST00000427157 GPR19Q15760 415 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 FOXB2Q5VYV0 432 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 BTBD8Q5XKL5 378 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 ARHGAP36Q6ZRI8 547 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 CKAP2LQ8IYA6 745 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 PTPRN2Q92932 1015 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 NEIL1Q96FI4 390 aaPredicted RBP5.55□□□□□ -1.52
LINC02541-201ENST00000427157 SORCS2Q96PQ0 1159 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 CDC6Q99741 560 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 PCDHA8Q9Y5H6 950 aa5.55□□□□□ -1.52
LINC02541-201ENST00000427157 TRBV23-1A0A0A0MS06 115 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 ESYT3A0FGR9 886 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 ARVCFO00192 962 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 SLPIP03973 132 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 AMY2AP04746 511 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 PDE6AP16499 860 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 AMY2BP19961 511 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 GDF5P43026 501 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 TOP3AQ13472 1001 aaPredicted RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 MTERF2Q49AM1 385 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 FIGNQ5HY92 759 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 FAM209AQ5JX71 171 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 PTRH1Q86Y79 214 aaKnown RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 SCUBE1Q8IWY4 988 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 GIMAP8Q8ND71 665 aaPredicted RBP5.54□□□□□ -1.52
LINC02541-201ENST00000427157 PCDH19Q8TAB3 1148 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 CARD11Q9BXL7 1154 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 SEMA4AQ9H3S1 761 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
LINC02541-201ENST00000427157 DIAPH1O60610 1272 aaKnown RBP5.53□□□□□ -1.52
LINC02541-201ENST00000427157 AMHP03971 560 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 PYGMP11217 842 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ACVRL1P37023 503 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ZNF568Q3ZCX4 644 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 TAX1BP1Q86VP1 789 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 OSTM1Q86WC4 334 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ZFPM1Q8IX07 1006 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ZBTB38Q8NAP3 1195 aaPredicted RBP5.53□□□□□ -1.52
LINC02541-201ENST00000427157 FBXW5Q969U6 566 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 EXOC2Q96KP1 924 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ARHGAP28Q9P2N2 729 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ZFR2Q9UPR6 939 aaKnown RBP5.53□□□□□ -1.52
LINC02541-201ENST00000427157 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
LINC02541-201ENST00000427157 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 CUTAO60888 179 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 FZD7O75084 574 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 KRT15P19012 456 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 GJA4P35212 333 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 RRADP55042 308 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 JAM2P57087 298 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 RAC3P60763 192 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 IL13RA1P78552 427 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 GUCY1A3Q02108 690 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 HS1BP3Q53T59 392 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
LINC02541-201ENST00000427157 KCNK3O14649 394 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 SRGAP2CP0DJJ0 459 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 AOAHP28039 575 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 MC4RP32245 332 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 ETV4P43268 484 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 ZC3H6P61129 1189 aaKnown RBP5.51□□□□□ -1.53
LINC02541-201ENST00000427157 WDR72Q3MJ13 1102 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 NAALADL2Q58DX5 795 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 DPP8Q6V1X1 898 aaPredicted RBP5.51□□□□□ -1.53
LINC02541-201ENST00000427157 FUKQ8N0W3 1084 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 CCDC113Q9H0I3 377 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 INCENPQ9NQS7 918 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 OAZ3Q9UMX2 235 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 PCDHA9Q9Y5H5 950 aa5.51□□□□□ -1.53
LINC02541-201ENST00000427157 CCDC66A2RUB6 948 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms