RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NR5A1Q13285 461 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 DUSP28Q4G0W2 176 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
LINC01049-201ENST00000426840 GJC2Q5T442 439 aaPredicted RBP8.45□□□□□ -1.06
LINC01049-201ENST00000426840 SEPT14Q6ZU15 432 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 U2AF1L4Q8WU68 220 aaKnown RBP8.45□□□□□ -1.06
LINC01049-201ENST00000426840 COPS5Q92905 334 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
LINC01049-201ENST00000426840 C8orf76Q96K31 380 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 BCAS3Q9H6U6 928 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 EHMT1Q9H9B1 1298 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
LINC01049-201ENST00000426840 Q9Y3F1 56 aa8.45□□□□□ -1.06
LINC01049-201ENST00000426840 MYH7BA7E2Y1 1941 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 ST8SIA5O15466 376 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 DYNC1LI2O43237 492 aaPredicted RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 SIAH2O43255 324 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 ADAMTS4O75173 837 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 ARP10275 920 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 TXNP10599 105 aaKnown RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 TGFB3P10600 412 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 RARBP10826 455 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 CAPN2P17655 700 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 KRT2P35908 639 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 USP11P51784 963 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 GJA9P57773 515 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 SP2Q02086 613 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 TRIM29Q14134 588 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 LY6KQ17RY6 165 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 CCSAPQ6IQ19 270 aaPredicted RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 KRT25Q7Z3Z0 450 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 NLRX1Q86UT6 975 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 HSCBQ8IWL3 235 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 DIS3L2Q8IYB7 885 aaKnown RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 KLHDC9Q8NEP7 349 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 TBCKQ8TEA7 893 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 SCFD2Q8WU76 684 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 UPF3AQ9H1J1 476 aaKnown RBP8.44□□□□□ -1.06
LINC01049-201ENST00000426840 JADE2Q9NQC1 790 aa8.44□□□□□ -1.06
LINC01049-201ENST00000426840 HTTP42858 3142 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 IGLV3-22A0A075B6J6 115 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 CYP3A7-CYP3A51PA0A087WV96 503 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 MYADML2A6NDP7 307 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 FAM86B1E9PN63 330 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 NKRFO15226 690 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01049-201ENST00000426840 MAFGO15525 162 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 FIBPO43427 364 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 ATP9AO75110 1047 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 PGK1P00558 417 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 FAM86B2P0C5J1 330 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 CYP3A7P24462 503 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01049-201ENST00000426840 SOX10P56693 466 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 LRRC41Q15345 812 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 INF2Q27J81 1249 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 GNPTABQ3T906 1256 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 CEP55Q53EZ4 464 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 LARP1BQ659C4 914 aaKnown RBP8.43□□□□□ -1.06
LINC01049-201ENST00000426840 KCNV1Q6PIU1 500 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 PIK3AP1Q6ZUJ8 805 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 NIPA1Q7RTP0 329 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 UBE2Q1Q7Z7E8 422 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 ARRDC4Q8NCT1 418 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 HPS1Q92902 700 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 GPRASP2Q96D09 838 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 MBOAT7Q96N66 472 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 FOXP1Q9H334 677 aaPredicted RBP8.43□□□□□ -1.06
LINC01049-201ENST00000426840 XPNPEP3Q9NQH7 507 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
LINC01049-201ENST00000426840 CCDC194A0A1B0GVG4 234 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 A6NJR5 290 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 KIF28PB7ZC32 967 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 GH1P01241 217 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 KCNA2P16389 499 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 CST5P28325 142 aaPredicted RBP8.42□□□□□ -1.06
LINC01049-201ENST00000426840 ZNF76P36508 570 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 BEX3Q00994 111 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 ARHGAP1Q07960 439 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC01049-201ENST00000426840 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
LINC01049-201ENST00000426840 MOXD1Q6UVY6 613 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 TLK2Q86UE8 772 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 DHX37Q8IY37 1157 aaKnown RBP8.42□□□□□ -1.06
LINC01049-201ENST00000426840 LENG9Q96B70 501 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 SENP7Q9BQF6 1050 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 AP5M1Q9H0R1 490 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms