RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
COPS6-204ENST00000426712 PIBF1Q8WXW3 757 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 TMEM87BQ96K49 555 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 PLVAPQ9BX97 442 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 SMARCAD1Q9H4L7 1026 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 JADE2Q9NQC1 790 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 FAM50BQ9Y247 325 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 RWDD3Q9Y3V2 267 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 SUPT16HQ9Y5B9 1047 aaKnown RBP10.18□□□□□ -0.78
COPS6-204ENST00000426712 TECTAO75443 2155 aa10.18□□□□□ -0.78
COPS6-204ENST00000426712 PIEZO1Q92508 2521 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 RRN3P2A6NIE6 340 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 GRM6O15303 877 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 RPLP2P05387 115 aaKnown RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 GHRP10912 638 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 ZP2Q05996 745 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 HYAL1Q12794 435 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 CAMK1Q14012 370 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 COL9A3Q14050 684 aaPredicted RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 GRIK4Q16099 956 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 TSHZ1Q6ZSZ6 1077 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 FAM43BQ6ZT52 329 aaPredicted RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 TEX2Q8IWB9 1127 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 ADHFE1Q8IWW8 467 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 DNAJB3Q8WWF6 145 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 P2RX5Q93086 422 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 PCYT2Q99447 389 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 C11orf84Q9BUA3 381 aaPredicted RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 MYL10Q9BUA6 226 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 AGO3Q9H9G7 860 aaKnown RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 SEC63Q9UGP8 760 aaKnown RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 PLAGL2Q9UPG8 496 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 RBM8AQ9Y5S9 174 aaKnown RBP10.17□□□□□ -0.78
COPS6-204ENST00000426712 CDY2AQ9Y6F7 541 aa10.17□□□□□ -0.78
COPS6-204ENST00000426712 NFASCO94856 1347 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 ADGRA3Q8IWK6 1321 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
COPS6-204ENST00000426712 ATG7O95352 703 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 PLEKHA8P1O95397 391 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CALM1P0DP23 149 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CALM2P0DP24 149 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CALM3P0DP25 149 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
COPS6-204ENST00000426712 MCM5P33992 734 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CTNNB1P35222 781 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 SP4Q02446 784 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
COPS6-204ENST00000426712 PPFIA1Q13136 1202 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 ADAM15Q13444 863 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 MTMR1Q13613 665 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 NECTIN1Q15223 517 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
COPS6-204ENST00000426712 IER5Q5VY09 327 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CASC1Q6TDU7 716 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 PLPPR4Q7Z2D5 763 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 FANCBQ8NB91 859 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 LINC01599Q8WXQ3 324 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 KCNH6Q9H252 994 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 CLDND1Q9NY35 253 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 TUBE1Q9UJT0 475 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 PCDHA6Q9UN73 950 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 PCDHA8Q9Y5H6 950 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 PCDHA2Q9Y5H9 948 aa10.16□□□□□ -0.78
COPS6-204ENST00000426712 KDM3AQ9Y4C1 1321 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 MBTPS2O43462 519 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 DCXO43602 365 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 PRC1O43663 620 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 EYA4O95677 639 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 MMP1P03956 469 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 INSRRP14616 1297 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 MRPS6P82932 125 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 SGMS1Q86VZ5 419 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 CMTR2Q8IYT2 770 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 CMTR1Q8N1G2 835 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 NME8Q8N427 588 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 SPPL3Q8TCT6 385 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 GLG1Q92896 1179 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 TNPO1Q92973 898 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 MXRA8Q9BRK3 442 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 FTHL17Q9BXU8 183 aa10.15□□□□□ -0.78
COPS6-204ENST00000426712 UPF3BQ9BZI7 483 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 LSG1Q9H089 658 aaKnown RBP10.15□□□□□ -0.78
COPS6-204ENST00000426712 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 IGKV6D-21A0A0A0MT36 114 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 MEIS1O00470 390 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 SLC27A2O14975 620 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 DNAJB1P25685 340 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 MARK3P27448 753 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 CD52P31358 61 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 GTF2F1P35269 517 aaKnown RBP eCLIP10.14□□□□□ -0.79
COPS6-204ENST00000426712 IRS1P35568 1242 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 BTG3Q14201 252 aaPredicted RBP10.14□□□□□ -0.79
COPS6-204ENST00000426712 PLCB4Q15147 1175 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 UBE2SQ16763 222 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 HERC4Q5GLZ8 1057 aaPredicted RBP10.14□□□□□ -0.79
COPS6-204ENST00000426712 TMTC3Q6ZXV5 915 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 NPAS4Q8IUM7 802 aa10.14□□□□□ -0.79
COPS6-204ENST00000426712 CYP2W1Q8TAV3 490 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms