RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 DNAJB1P25685 340 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 CD52P31358 61 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 IGBP1P78318 339 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 PAN2Q504Q3 1202 aaKnown RBP16.88■□□□□ 0.29
PDAP1-202ENST00000426447 IER5Q5VY09 327 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 ADGRD2Q7Z7M1 963 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 PLEKHM2Q8IWE5 1019 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 CMTR2Q8IYT2 770 aaKnown RBP16.88■□□□□ 0.29
PDAP1-202ENST00000426447 POF1BQ8WVV4 589 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 SEPT1Q8WYJ6 367 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 FTHL17Q9BXU8 183 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 FRMPD4Q14CM0 1322 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 RALGAPA2Q2PPJ7 1873 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 LOC730098B7Z3J9 87 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 M0QZ92 97 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 IBSPP21815 317 aaPredicted RBP16.87■□□□□ 0.29
PDAP1-202ENST00000426447 MRPS6P82932 125 aaKnown RBP16.87■□□□□ 0.29
PDAP1-202ENST00000426447 COASYQ13057 564 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 NPAS4Q8IUM7 802 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 FBXL6Q8N531 539 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 SMRP1Q8NCR6 262 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 CDHR1Q96JP9 859 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 FAM49AQ9H0Q0 323 aaPredicted RBP16.87■□□□□ 0.29
PDAP1-202ENST00000426447 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 TLE6Q9H808 572 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 AGO3Q9H9G7 860 aaKnown RBP16.87■□□□□ 0.29
PDAP1-202ENST00000426447 LRFN2Q9ULH4 789 aa16.87■□□□□ 0.29
PDAP1-202ENST00000426447 BARX2Q9UMQ3 279 aaPredicted RBP16.87■□□□□ 0.29
PDAP1-202ENST00000426447 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 WTAPQ15007 396 aa16.86■□□□□ 0.29
PDAP1-202ENST00000426447 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
PDAP1-202ENST00000426447 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
PDAP1-202ENST00000426447 PHF7Q9BWX1 381 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
PDAP1-202ENST00000426447 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-202ENST00000426447 MYO7AQ13402 2215 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
PDAP1-202ENST00000426447 RRN3P2A6NIE6 340 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 ATP9AO75110 1047 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 MARCH8Q5T0T0 291 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
PDAP1-202ENST00000426447 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
PDAP1-202ENST00000426447 GPRASP2Q96D09 838 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 RRP36Q96EU6 259 aaKnown RBP16.85■□□□□ 0.29
PDAP1-202ENST00000426447 PKD2L1Q9P0L9 805 aa16.85■□□□□ 0.29
PDAP1-202ENST00000426447 PER2O15055 1255 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 SCG2P13521 617 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 SIGLEC14Q08ET2 396 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 TROAPQ12815 778 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 TCF15Q12870 199 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 PAK2Q13177 524 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 CBX2Q14781 532 aaPredicted RBP16.84■□□□□ 0.29
PDAP1-202ENST00000426447 LINC01599Q8WXQ3 324 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 ZBTB10Q96DT7 871 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 IRF2BPLQ9H1B7 796 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 SENP2Q9HC62 589 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
PDAP1-202ENST00000426447 PADI3Q9ULW8 664 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 PCDHB12Q9Y5F1 795 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 TRPV2Q9Y5S1 764 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 SQORQ9Y6N5 450 aa16.84■□□□□ 0.29
PDAP1-202ENST00000426447 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
PDAP1-202ENST00000426447 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 MEIS2O14770 477 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 INSRRP14616 1297 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 KCNA2P16389 499 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 ATOH1Q92858 354 aaPredicted RBP16.83■□□□□ 0.28
PDAP1-202ENST00000426447 AZI2Q9H6S1 392 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 AAASQ9NRG9 546 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 FAM86C1Q9NVL1 165 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 TRPC6Q9Y210 931 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 PCDHGC5Q9Y5F6 944 aa16.83■□□□□ 0.28
PDAP1-202ENST00000426447 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 WDFY4Q6ZS81 3184 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 GFRA3O60609 400 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 GLP2RO95838 553 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 GATMP50440 423 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 NFX1Q12986 1120 aaKnown RBP16.82■□□□□ 0.28
PDAP1-202ENST00000426447 MTMR1Q13613 665 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 ZBTB33Q86T24 672 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 CRIPAKQ8N1N5 446 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 NCOA7Q8NI08 942 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
PDAP1-202ENST00000426447 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
PDAP1-202ENST00000426447 CELF4Q9BZC1 486 aaKnown RBP16.82■□□□□ 0.28
PDAP1-202ENST00000426447 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
PDAP1-202ENST00000426447 ATF7P17544 494 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms