RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TAF2Q6P1X5 1199 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 CNKSR3Q6P9H4 555 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 PLPPR4Q7Z2D5 763 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 ORC3Q9UBD5 711 aaPredicted RBP19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 EYSQ5T1H1 3165 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 CHD9Q3L8U1 2897 aa19.84■□□□□ 0.77
SLC6A1-202ENST00000425938 RRN3P2A6NIE6 340 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 BACH1O14867 736 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 ATG7O95352 703 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 KCNJ6P48051 423 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 SLC26A2P50443 739 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 ADAM17P78536 824 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 GPNMBQ14956 572 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 ME3Q16798 604 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 C8orf34Q49A92 452 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 FAM160B1Q5W0V3 765 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 MIS18BP1Q6P0N0 1132 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 TRAF7Q6Q0C0 670 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 NECAB1Q8N987 351 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 TBCKQ8TEA7 893 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 UIMC1Q96RL1 719 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 PCYT2Q99447 389 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 NKX2-4Q9H2Z4 354 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 SLC28A3Q9HAS3 691 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 TUBE1Q9UJT0 475 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 PCDHA11Q9Y5I1 949 aa19.83■□□□□ 0.77
SLC6A1-202ENST00000425938 UNC80Q8N2C7 3258 aa19.83■□□□□ 0.76
SLC6A1-202ENST00000425938 WDR81Q562E7 1941 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 DHX15O43143 795 aaKnown RBP19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 CCNE2O96020 404 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 KRT76Q01546 638 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 ZNF746Q6NUN9 644 aaPredicted RBP19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 KRT25Q7Z3Z0 450 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 RSPH3Q86UC2 560 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 PHOSPHO2Q8TCD6 241 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 KCNJ14Q9UNX9 436 aa19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 YBX2Q9Y2T7 364 aaKnown RBP19.82■□□□□ 0.76
SLC6A1-202ENST00000425938 ABHD14A-ACY1A0A1B0GW23 586 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 M0R2N6 131 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 EFCAB14O75071 495 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 LARGE1O95461 756 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 CTDNEP1O95476 244 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 CTSHP09668 335 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 RABGGTBP53611 331 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 IGBP1P78318 339 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 IKBKEQ14164 716 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 MBTPS1Q14703 1052 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 NONOQ15233 471 aaKnown RBP eCLIP19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 ABHD15Q6UXT9 468 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 SMAP1Q8IYB5 467 aaPredicted RBP19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 LENG9Q96B70 501 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 PHF20Q9BVI0 1012 aa19.81■□□□□ 0.76
SLC6A1-202ENST00000425938 MICAL3Q7RTP6 2002 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 IGKV6D-21A0A0A0MT36 114 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 CCDC194A0A1B0GVG4 234 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 POTEB3A0JP26 581 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 MBLAC1A4D2B0 266 aaPredicted RBP19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 RPLP2P05387 115 aaKnown RBP19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 INSRRP14616 1297 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 PLCB4Q15147 1175 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 NPY5RQ15761 445 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 PDXDC2PQ6P474 469 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 POTEBQ6S5H4 581 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 GAS2L1Q99501 681 aaPredicted RBP19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 ZNF302Q9NR11 478 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 SAMM50Q9Y512 469 aa19.8■□□□□ 0.76
SLC6A1-202ENST00000425938 KIF28PB7ZC32 967 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 DLL1O00548 723 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 MSH4O15457 936 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 GAS7O60861 476 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 PSAPP07602 524 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 WDR5P61964 334 aaKnown RBP19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 SWSAP1Q6NVH7 229 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 RUFY4Q6ZNE9 571 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 RPAINQ86UA6 219 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 CCDC60Q8IWA6 550 aaPredicted RBP19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 SEPT8Q92599 483 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 RIT2Q99578 217 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 PRDM12Q9H4Q4 367 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 PCDHA10Q9Y5I2 948 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 EVPLQ92817 2033 aa19.79■□□□□ 0.76
SLC6A1-202ENST00000425938 PRUNE2Q8WUY3 3088 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 WDR64B1ANS9 1081 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 HBP1O60381 514 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 MYOGP15173 224 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 INF2Q27J81 1249 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 Q4G0T1 1027 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 FAM26DQ5JW98 314 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 MARCH8Q5T0T0 291 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 LRCH2Q5VUJ6 765 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 PPP2R2DQ66LE6 453 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 MOXD1Q6UVY6 613 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 HERC6Q8IVU3 1022 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 CKAP2LQ8IYA6 745 aa19.78■□□□□ 0.76
SLC6A1-202ENST00000425938 NSUN7Q8NE18 718 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms