RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 MCTP1Q6DN14 999 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SEPT14Q6ZU15 432 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 BRAPQ7Z569 592 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NEK8Q86SG6 692 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NLRX1Q86UT6 975 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 C4orf32Q8N8J7 132 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SCFD2Q8WU76 684 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SENP7Q9BQF6 1050 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 AGO4Q9HCK5 861 aaKnown RBP8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KCNH7Q9NS40 1196 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 Q9Y3F1 56 aa8.02□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MSH4O15457 936 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SLC37A4O43826 429 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DUSP11O75319 330 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GJB1P08034 283 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZSCAN22P10073 491 aaPredicted RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TXNP10599 105 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 AKR1A1P14550 325 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GCFC2P16383 781 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZNF76P36508 570 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TRAPPC10P48553 1259 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GJA9P57773 515 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ITGB3BPQ13352 177 aaPredicted RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MTMR1Q13613 665 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TTLL4Q14679 1199 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LETM2Q2VYF4 491 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GNPTABQ3T906 1256 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR16Q569H4 304 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CELF3Q5SZQ8 465 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KCNV1Q6PIU1 500 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 B3GNT9Q6UX72 402 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PLA2G4DQ86XP0 818 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KLHDC9Q8NEP7 349 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ETNPPLQ8TBG4 499 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 HAS1Q92839 578 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 COPS5Q92905 334 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CDHR1Q96JP9 859 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MTMR9Q96QG7 549 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 UPF3AQ9H1J1 476 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZSCAN16Q9H4T2 348 aaPredicted RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KCNMB3Q9NPA1 279 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DDX20Q9UHI6 824 aaKnown RBP8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MRVI1Q9Y6F6 885 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KIAA1217Q5T5P2 1943 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NFASCO94856 1347 aa8.01□□□□□ -1.13
CHCHD3P1-201ENST00000425516 IPO5O00410 1097 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TBX3O15119 743 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MSCO60682 206 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ADAMTS4O75173 837 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PSMD10O75832 226 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SGPL1O95470 568 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 F13A1P00488 732 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 UBA1P22314 1058 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CNGA1P29973 690 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR20EP86478 221 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR20CP86479 221 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR20DP86480 221 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR20BP86481 221 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRR20AP86496 221 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SETQ01105 290 aaPredicted RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ORC2Q13416 577 aaPredicted RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GNL2Q13823 731 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 RILPL1Q5EBL4 403 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TTC38Q5R3I4 469 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ANO1Q5XXA6 986 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FAM173BQ6P4H8 233 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SLC5A5Q92911 643 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 IPO9Q96P70 1041 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 RNF208Q9H0X6 261 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TMEM60Q9H2L4 133 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 POLR3EQ9NVU0 708 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DDX25Q9UHL0 483 aaKnown RBP8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 OGDHLQ9ULD0 1010 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TELO2Q9Y4R8 837 aa8□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GSTTP1A0A1W2PQM5 241 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MYADML2A6NDP7 307 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 A6NJR5 290 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DYNC1LI2O43237 492 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ATG7O95352 703 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GGPS1O95749 300 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MYCP01106 439 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GH1P01241 217 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 RARBP10826 455 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CST5P28325 142 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MCM7P33993 719 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GJA8P48165 433 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms