RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 KLHDC9Q8NEP7 349 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 SPATA33Q96N06 139 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 SENP7Q9BQF6 1050 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 BPIFA3Q9BQP9 254 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 LAD1O00515 517 aa17.53■□□□□ 0.4
SHOX2-202ENST00000425436 FARP2O94887 1054 aaPredicted RBP17.53■□□□□ 0.4
SHOX2-202ENST00000425436 ADCY5O95622 1261 aa17.53■□□□□ 0.4
SHOX2-202ENST00000425436 TPM3P06753 285 aa17.53■□□□□ 0.4
SHOX2-202ENST00000425436 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
SHOX2-202ENST00000425436 ATP2C1P98194 919 aaPredicted RBP17.53■□□□□ 0.4
SHOX2-202ENST00000425436 ORC2Q13416 577 aaPredicted RBP17.53■□□□□ 0.4
SHOX2-202ENST00000425436 KRBA2Q6ZNG9 492 aa17.53■□□□□ 0.4
SHOX2-202ENST00000425436 DIS3LQ8TF46 1054 aaKnown RBP17.53■□□□□ 0.4
SHOX2-202ENST00000425436 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
SHOX2-202ENST00000425436 BECN2A8MW95 431 aa17.52■□□□□ 0.4
SHOX2-202ENST00000425436 DHX15O43143 795 aaKnown RBP17.52■□□□□ 0.4
SHOX2-202ENST00000425436 CAPN15O75808 1086 aa17.52■□□□□ 0.4
SHOX2-202ENST00000425436 GCFC2P16383 781 aaKnown RBP17.52■□□□□ 0.4
SHOX2-202ENST00000425436 METTL7BQ6UX53 244 aa17.52■□□□□ 0.4
SHOX2-202ENST00000425436 GIMAP8Q8ND71 665 aaPredicted RBP17.52■□□□□ 0.4
SHOX2-202ENST00000425436 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.4
SHOX2-202ENST00000425436 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
SHOX2-202ENST00000425436 A6NJR5 290 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 ESPNB1AK53 854 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 ASGR1P07306 291 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 MYL3P08590 195 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 CPT1AP50416 773 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 NLRP12P59046 1061 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 NKX3-2P78367 333 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 CCSAPQ6IQ19 270 aaPredicted RBP17.52■□□□□ 0.39
SHOX2-202ENST00000425436 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 HAS1Q92839 578 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 SLC5A5Q92911 643 aa17.52■□□□□ 0.39
SHOX2-202ENST00000425436 EMID1Q96A84 441 aaPredicted RBP17.52■□□□□ 0.39
SHOX2-202ENST00000425436 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.39
SHOX2-202ENST00000425436 JPH1Q9HDC5 661 aaPredicted RBP17.52■□□□□ 0.39
SHOX2-202ENST00000425436 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 GOLGA6L6A8MZA4 724 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 KBTBD13C9JR72 458 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 DNM1LO00429 736 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 NOP56O00567 594 aaKnown RBP17.51■□□□□ 0.39
SHOX2-202ENST00000425436 MARCH6O60337 910 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
SHOX2-202ENST00000425436 MMP3P08254 477 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 ACLYP53396 1101 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 TPM4P67936 248 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 PTGDRQ13258 359 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 LRCH2Q5VUJ6 765 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 CXCL17Q6UXB2 119 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 ZSCAN30Q86W11 494 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 GPR20Q99678 358 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 SLC9A2Q9UBY0 812 aa17.51■□□□□ 0.39
SHOX2-202ENST00000425436 NEMFO60524 1076 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 CCNE2O96020 404 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-202ENST00000425436 LONP1P36776 959 aaKnown RBP17.5■□□□□ 0.39
SHOX2-202ENST00000425436 IQCB1Q15051 598 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 CALCRLQ16602 461 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 BRDTQ58F21 947 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-202ENST00000425436 PCSK9Q8NBP7 692 aaKnown RBP17.5■□□□□ 0.39
SHOX2-202ENST00000425436 SENP6Q9GZR1 1112 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-202ENST00000425436 KCNMB3Q9NPA1 279 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 TBC1D22BQ9NU19 505 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 NFASCO94856 1347 aa17.5■□□□□ 0.39
SHOX2-202ENST00000425436 GSTTP1A0A1W2PQM5 241 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 ZEB2O60315 1214 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 GAS7O60861 476 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 DGKDQ16760 1214 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 LONRF3Q496Y0 759 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
SHOX2-202ENST00000425436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.49■□□□□ 0.39
SHOX2-202ENST00000425436 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 PPP1R13LQ8WUF5 828 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 VTI1AQ96AJ9 217 aa17.49■□□□□ 0.39
SHOX2-202ENST00000425436 TSEN34Q9BSV6 310 aaKnown RBP17.49■□□□□ 0.39
SHOX2-202ENST00000425436 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
SHOX2-202ENST00000425436 CHMP2AO43633 222 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 PSMD10O75832 226 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 TXLNAP40222 546 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 PRPHP41219 470 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 TXKP42681 527 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 ACTR2P61160 394 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
SHOX2-202ENST00000425436 SARM1Q6SZW1 724 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 TRIML1Q8N9V2 468 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 SEPT1Q8WYJ6 367 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 RIT2Q99578 217 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 TEKT3Q9BXF9 490 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms