RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 MYO1AQ9UBC5 1043 aa12.76□□□□□ -0.37
UBR4-207ENST00000425413 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
UBR4-207ENST00000425413 A0A1W2PQJ5 194 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 CETN3O15182 167 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 GAS7O60861 476 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
UBR4-207ENST00000425413 CASP4P49662 377 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 VSNL1P62760 191 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 CXCL9Q07325 125 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 TERF2Q15554 542 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 WHAMMP3Q1A5X7 153 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 LDHDQ86WU2 507 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 SYT2Q8N9I0 419 aaPredicted RBP12.75□□□□□ -0.37
UBR4-207ENST00000425413 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 GDAP1L1Q96MZ0 367 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 GMLQ99445 158 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 NCK2O43639 380 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 INPP5BP32019 993 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 HOXD13P35453 343 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 MATR3P43243 847 aaKnown RBP eCLIP12.75□□□□□ -0.379e-6■■■■□ 21.7
UBR4-207ENST00000425413 MAGEA1P43355 309 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
UBR4-207ENST00000425413 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 MYCT1Q8N699 235 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 NOL4O94818 638 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 PTPROQ16827 1216 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 TRIM59Q8IWR1 403 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 CHURC1Q8WUH1 139 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 SALL4Q9UJQ4 1053 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 COL4A5P29400 1685 aa12.75□□□□□ -0.37
UBR4-207ENST00000425413 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 TLR2O60603 784 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 SLC9A1P19634 815 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 KCNA3P22001 575 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 GYS2P54840 703 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 KNOP1Q1ED39 458 aaKnown RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 WRAP73Q9P2S5 460 aaPredicted RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 NFIBO00712 420 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 WNT10BO00744 389 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 TBX3O15119 743 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 SLITRK3O94933 977 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 FAM13AO94988 1023 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 CAP2P40123 477 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 OTOP1Q7RTM1 612 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 ARMCX3Q9UH62 379 aaPredicted RBP12.74□□□□□ -0.37
UBR4-207ENST00000425413 CCPG1Q9ULG6 757 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
UBR4-207ENST00000425413 AKAP3O75969 853 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 KIF20AO95235 890 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 CIITAP33076 1130 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 MMP14P50281 582 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 RASA3Q14644 834 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 COG2Q14746 738 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 SFMBT2Q5VUG0 894 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 RINT1Q6NUQ1 792 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
UBR4-207ENST00000425413 ZNRF3Q9ULT6 936 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 ALAS1P13196 640 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 GJB7Q6PEY0 223 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 FUT8Q9BYC5 575 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 ADAMTS1Q9UHI8 967 aa12.73□□□□□ -0.37
UBR4-207ENST00000425413 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 HOOK2Q96ED9 719 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 UNC45AQ9H3U1 944 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms