RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IGDCC4Q8TDY8 1250 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 IRF2BPLQ9H1B7 796 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GLT8D2Q9H1C3 349 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 BCAS3Q9H6U6 928 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 JADE2Q9NQC1 790 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PUF60Q9UHX1 559 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PLAGL2Q9UPG8 496 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TRPV2Q9Y5S1 764 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
HLA-DQB3-203ENST00000425319 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 MEIS2O14770 477 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GRM6O15303 877 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 INSRRP14616 1297 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CHMLP26374 656 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 STAT5BP51692 787 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 HYAL1Q12794 435 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ADAM15Q13444 863 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 BMS1Q14692 1282 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 COL19A1Q14993 1142 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CLUL1Q15846 466 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CTC1Q2NKJ3 1217 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 SUGP1Q8IWZ8 645 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ZNF689Q96CS4 500 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 CELF4Q9BZC1 486 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 FAM49AQ9H0Q0 323 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 JPH1Q9HDC5 661 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 ALG13Q9NP73 1137 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 VCANP13611 3396 aa14.03□□□□□ -0.16
HLA-DQB3-203ENST00000425319 TET1Q8NFU7 2136 aa14.02□□□□□ -0.16
HLA-DQB3-203ENST00000425319 GSTTP1A0A1W2PQM5 241 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 DENND3A2RUS2 1198 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MBLAC1A4D2B0 266 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PRC1O43663 620 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SCG2P13521 617 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 IRS1P35568 1242 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MRE11P49959 708 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KRT76Q01546 638 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 UBE3AQ05086 875 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NFX1Q12986 1120 aaKnown RBP14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SEMA3FQ13275 785 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 FAM160B1Q5W0V3 765 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PLPPR4Q7Z2D5 763 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RNF135Q8IUD6 432 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 EDAQ92838 391 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MAP4K1Q92918 833 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TLE6Q9H808 572 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PKD2L1Q9P0L9 805 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PCDHA2Q9Y5H9 948 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 UBIAD1Q9Y5Z9 338 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SMIM35A0A1B0GVV1 85 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 GPR182O15218 404 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ATP9AO75110 1047 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CSPG5O95196 566 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KCNA2P16389 499 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CD52P31358 61 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 LIFRP42702 1097 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PTH1RQ03431 593 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MGAT3Q09327 533 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RUFY4Q6ZNE9 571 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 EFHBQ8N7U6 833 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 EXOC6Q8TAG9 804 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 POF1BQ8WVV4 589 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PBXIP1Q96AQ6 731 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 FBXL18Q96ME1 805 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CDCA3Q99618 268 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 C1orf112Q9NSG2 853 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PADI3Q9ULW8 664 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KIAA1217Q5T5P2 1943 aa14.01□□□□□ -0.17
HLA-DQB3-203ENST00000425319 BACH1O14867 736 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SGSM2O43147 1006 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 HBP1O60381 514 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PPFIA3O75145 1194 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ITGB5P18084 799 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 LTBRP36941 435 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RNF20Q5VTR2 975 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MCTP2Q6DN12 878 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 BMP8AQ7Z5Y6 402 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 FANCBQ8NB91 859 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SPPL3Q8TCT6 385 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RBM28Q9NW13 759 aaKnown RBP14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 GINS2Q9Y248 185 aa14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RBM8AQ9Y5S9 174 aaKnown RBP14□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NFASCO94856 1347 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 HOXA2O43364 376 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RPS6KA5O75582 802 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NRIP1P48552 1158 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms