RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 HAS3O00219 553 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
LMO3-206ENST00000424192 SORBS3O60504 671 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 LGR5O75473 907 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 PSMD10O75832 226 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 BMP15O95972 392 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 PSAPP07602 524 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 GNAT1P11488 350 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
LMO3-206ENST00000424192 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 DPF3Q92784 378 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 GLG1Q92896 1179 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 C16orf70Q9BSU1 422 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
LMO3-206ENST00000424192 PCDHA10Q9Y5I2 948 aa13.2□□□□□ -0.3
LMO3-206ENST00000424192 KIF28PB7ZC32 967 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
LMO3-206ENST00000424192 BACH1O14867 736 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 STX6O43752 255 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 EDIL3O43854 480 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 PQBP1O60828 265 aaKnown RBP13.19□□□□□ -0.3
LMO3-206ENST00000424192 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMO3-206ENST00000424192 ATG7O95352 703 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
LMO3-206ENST00000424192 CLTBP09497 229 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 SYT1P21579 422 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 CDK7P50613 346 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 KIAA0753Q2KHM9 967 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 NBPF20Q3BBV1 942 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 PLPPR4Q7Z2D5 763 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 AFAP1L1Q8TED9 768 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 KAT2BQ92831 832 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 ATP6V0A1Q93050 837 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
LMO3-206ENST00000424192 NOD1Q9Y239 953 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 SAMM50Q9Y512 469 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
LMO3-206ENST00000424192 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 CCNE2O96020 404 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 MCM7P33993 719 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 PSMC6P62333 389 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 TLE2Q04725 743 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 UTP14CQ5TAP6 766 aaKnown RBP13.18□□□□□ -0.3
LMO3-206ENST00000424192 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 FAM126BQ8IXS8 530 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 ZNF302Q9NR11 478 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 DISC1Q9NRI5 854 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
LMO3-206ENST00000424192 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 NRCAMQ92823 1304 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 CHMP2AO43633 222 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
LMO3-206ENST00000424192 STAT5BP51692 787 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 TRIM50Q86XT4 487 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 UNC45AQ9H3U1 944 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 PDLIM7Q9NR12 457 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 COL1A2P08123 1366 aa13.17□□□□□ -0.3
LMO3-206ENST00000424192 GRIN2DO15399 1336 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 CAND2O75155 1236 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 CD4P01730 458 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 SMIM10L2AP0DMW4 78 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 SMIM10L2BP0DMW5 78 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 HOXC8P31273 242 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 PRPHP41219 470 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 PPFIA1Q13136 1202 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 CCDC60Q8IWA6 550 aaPredicted RBP13.16□□□□□ -0.3
LMO3-206ENST00000424192 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 ATP8B4Q8TF62 1192 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 HAS1Q92839 578 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
LMO3-206ENST00000424192 MTMR6Q9Y217 621 aa13.16□□□□□ -0.3
LMO3-206ENST00000424192 MKI67P46013 3256 aaKnown RBP13.15□□□□□ -0.3
LMO3-206ENST00000424192 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
LMO3-206ENST00000424192 KIAA0355O15063 1070 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms