RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 RPGRIP1LQ68CZ1 1315 aa3.57□□□□□ -1.84
PMS1-209ENST00000424059 ZRANB2O95218 330 aaKnown RBP eCLIP3.56□□□□□ -1.84
PMS1-209ENST00000424059 GDF5P43026 501 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 SLC20A2Q08357 652 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 NFATC3Q12968 1075 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 WDR78Q5VTH9 848 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 GIMAP6Q6P9H5 292 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 CRIP3Q6Q6R5 217 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 REXO1L1PQ8IX06 675 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 KBTBD2Q8IY47 623 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 ARRDC4Q8NCT1 418 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 SREK1Q8WXA9 508 aaKnown RBP3.56□□□□□ -1.84
PMS1-209ENST00000424059 KLC2Q9H0B6 622 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 PDCL3Q9H2J4 239 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 SLC6A20Q9NP91 592 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 KLHL42Q9P2K6 505 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 FBXL7Q9UJT9 491 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 ADAM29Q9UKF5 820 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 TCAF1Q9Y4C2 921 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 HMGB1P1B2RPK0 211 aaPredicted RBP3.56□□□□□ -1.84
PMS1-209ENST00000424059 TBX1O43435 398 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 SH3BP5O60239 455 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 DDAH1O94760 285 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 MLLT6P55198 1093 aaPredicted RBP3.56□□□□□ -1.84
PMS1-209ENST00000424059 CDSNQ15517 529 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 TAF3Q5VWG9 929 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 VASNQ6EMK4 673 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 TRMT10BQ6PF06 316 aaKnown RBP3.56□□□□□ -1.84
PMS1-209ENST00000424059 LIMS2Q7Z4I7 341 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 STK32CQ86UX6 486 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 DTX3Q8N9I9 347 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 PMM1Q92871 262 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 CHAMP1Q96JM3 812 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 SYT3Q9BQG1 590 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 METTL14Q9HCE5 456 aaKnown RBP3.56□□□□□ -1.84
PMS1-209ENST00000424059 ST6GALNAC2Q9UJ37 374 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 CROTQ9UKG9 612 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 FRMD4BQ9Y2L6 1034 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 TESMINQ9Y4I5 508 aa3.56□□□□□ -1.84
PMS1-209ENST00000424059 IQCA1LA6NCM1 817 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 B2RBV5 119 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 BDNFP23560 247 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 ICAM4Q14773 271 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 SLC10A6Q3KNW5 377 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 HS1BP3Q53T59 392 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 DPH6Q7L8W6 267 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 SLC16A11Q8NCK7 471 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 IGDCC4Q8TDY8 1250 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 SNRNP27Q8WVK2 155 aaKnown RBP3.55□□□□□ -1.84
PMS1-209ENST00000424059 GPATCH3Q96I76 525 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 AJUBAQ96IF1 538 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 SORCS2Q96PQ0 1159 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 JADE2Q9NQC1 790 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 WASHC2AQ641Q2 1341 aa3.55□□□□□ -1.84
PMS1-209ENST00000424059 CCDC194A0A1B0GVG4 234 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 PATE3B3GLJ2 98 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 GPR42O15529 346 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 COL6A1P12109 1028 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 C6P13671 934 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 SSR1P43307 286 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 SATB1Q01826 763 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 SMAD2Q15796 467 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 PRSS53Q2L4Q9 553 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 CCDC184Q52MB2 194 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 MRM1Q6IN84 353 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 DENND5AQ6IQ26 1287 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 Q6ZUG5 572 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 RALYLQ86SE5 291 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 PROSER1Q86XN7 944 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 CREBRFQ8IUR6 639 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 UHMK1Q8TAS1 419 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 SH3RF3Q8TEJ3 882 aaPredicted RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 DCAF4Q8WV16 495 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 ZSWIM3Q96MP5 696 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 LGR4Q9BXB1 951 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 CDIP1Q9H305 208 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 DEF6Q9H4E7 631 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 MSL2Q9HCI7 577 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 SLC4A7Q9Y6M7 1214 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 CFAP69A5D8W1 941 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 MUSKO15146 869 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 FZD7O75084 574 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 PARNO95453 639 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 LCP1P13796 627 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 FAHP16930 419 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 GYS2P54840 703 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 SPIRE1Q08AE8 756 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 KIZQ2M2Z5 673 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 C4orf46Q504U0 113 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 HABP4Q5JVS0 413 aaKnown RBP3.54□□□□□ -1.84
PMS1-209ENST00000424059 OTOP3Q7RTS5 596 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 IFNL2Q8IZJ0 200 aa3.54□□□□□ -1.84
PMS1-209ENST00000424059 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.54□□□□□ -1.84
PMS1-209ENST00000424059 A0A1W2PQU0 124 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 SUV39H1O43463 412 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 EIF3JO75822 258 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 STK10O94804 968 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 FGRP09769 529 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 FGFR1P11362 822 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 TCF3P15923 654 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms