RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 TRAPPC9Q96Q05 1148 aa7.42□□□□□ -1.22
CNOT4-205ENST00000423368 SMC6Q96SB8 1091 aa7.42□□□□□ -1.22
CNOT4-205ENST00000423368 TPK1Q9H3S4 243 aa7.42□□□□□ -1.22
CNOT4-205ENST00000423368 DIS3Q9Y2L1 958 aaKnown RBP7.42□□□□□ -1.22
CNOT4-205ENST00000423368 GAPVD1Q14C86 1478 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 E7ENQ6 273 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 CYTH3O43739 400 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 GHRP10912 638 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 TRPC1P48995 793 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 KLK7P49862 253 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 ZNF131P52739 623 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 KIF22Q14807 665 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 LIN52Q52LA3 116 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 RFWD3Q6PCD5 774 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 KLHL35Q6PF15 583 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 USP49Q70CQ1 688 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 OSTM1Q86WC4 334 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 UTP4Q969X6 686 aaKnown RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 SNX27Q96L92 541 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 CATSPER2Q96P56 530 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 FERD3LQ96RJ6 166 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 TTC1Q99614 292 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 TRPC7Q9HCX4 862 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 KCNMB3Q9NPA1 279 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 HACD3Q9P035 362 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 CARD8Q9Y2G2 431 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 ABCA10Q8WWZ4 1543 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 SUPT6HQ7KZ85 1726 aaKnown RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 MYH10P35580 1976 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 PSMD14O00487 310 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 ASMTLO95671 621 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 UBTFL1P0CB47 393 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 ATP8B2P98198 1209 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 PPP2R5CQ13362 524 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 LSAMPQ13449 338 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 PAOXQ6QHF9 649 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 NOP9Q86U38 636 aaKnown RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 USP6NLQ92738 828 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 MPHOSPH6Q99547 160 aaKnown RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 ADAM33Q9BZ11 813 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 NACAP1Q9BZK3 213 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 UBA5Q9GZZ9 404 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 RAB17Q9H0T7 212 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 CCDC68Q9H2F9 335 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 HAUS4Q9H6D7 363 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 AGPAT5Q9NUQ2 364 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 DBR1Q9UK59 544 aaKnown RBP7.41□□□□□ -1.22
CNOT4-205ENST00000423368 PCDHGA3Q9Y5H0 932 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 MED14O60244 1454 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 NUP160Q12769 1436 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 MICAL3Q7RTP6 2002 aa7.41□□□□□ -1.22
CNOT4-205ENST00000423368 FBP2O00757 339 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 PENKP01210 267 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 LYNP07948 512 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 POTEJP0CG39 1038 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 GNAZP19086 355 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TCEA1P23193 301 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 GEMIN4P57678 1058 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 NLRP5P59047 1200 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 HAND2P61296 217 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 ATP1A4Q13733 1029 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 C16orf72Q14CZ0 275 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 KYNUQ16719 465 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TYW1BQ6NUM6 668 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 IRGCQ6NXR0 463 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 AACSQ86V21 672 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 CABP7Q86V35 215 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 DNAAF5Q86Y56 855 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 DEPDC4Q8N2C3 294 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 ERMNQ8TAM6 284 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 LPIN2Q92539 896 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 ERP27Q96DN0 273 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 CENPKQ9BS16 269 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 BLZF1Q9H2G9 400 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 DENND2DQ9H6A0 471 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 A2MP01023 1474 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 MYOCOSA0A1B0GUC4 107 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 CFAP69A5D8W1 941 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 FAM196BA6NMK8 535 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TEX28O15482 410 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 RAD51CO43502 376 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 BCRP11274 1271 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 NR4A1P22736 598 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TKTP29401 623 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 SLC16A2P36021 539 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 PAPD7Q5XG87 772 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 VASH1Q7L8A9 365 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 SCYL3Q8IZE3 742 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 GIPC3Q8TF64 312 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 NACC2Q96BF6 587 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 CTAGE1Q96RT6 745 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 FNBP1Q96RU3 617 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TBCBQ99426 244 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 NAA15Q9BXJ9 866 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 TRNAU1APQ9NX07 287 aaKnown RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 CYP39A1Q9NYL5 469 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms