RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 LSG1Q9H089 658 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 GCNT4Q9P109 453 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 ZNF215Q9UL58 517 aaPredicted RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 H2AFYO75367 372 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 TRPA1O75762 1119 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 AFPP02771 609 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 DNAAF3Q8N9W5 541 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 FOXP3Q9BZS1 431 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 ST7Q9NRC1 585 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 MAPKBP1O60336 1514 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 IGHDP01880 384 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 EPM2AIP1Q7L775 607 aaPredicted RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 SNX19Q92543 992 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 OLFM1Q99784 485 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 UBN1Q9NPG3 1134 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 SEL1LQ9UBV2 794 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 TMEM191CA6NGB0 347 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 E7ENQ6 273 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 SOX6P35712 828 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 TRIM72Q6ZMU5 477 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 PYROXD1Q8WU10 500 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 ALKBH8Q96BT7 664 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 NDUFA13Q9P0J0 144 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 ADD3Q9UEY8 706 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 USP19O94966 1318 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 SNX2O60749 519 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 TOMM70O94826 608 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.95□□□□□ -0.82
CD109-202ENST00000422508 CSTF3Q12996 717 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 EFTUD2Q15029 972 aaKnown RBP eCLIP9.95□□□□□ -0.82
CD109-202ENST00000422508 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 CENPPQ6IPU0 288 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 TRMT10CQ7L0Y3 403 aaKnown RBP9.95□□□□□ -0.82
CD109-202ENST00000422508 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 FPGT-TNNI3KV9GXZ4 949 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 PFASO15067 1338 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 ADCY10Q96PN6 1610 aa9.95□□□□□ -0.82
CD109-202ENST00000422508 PDE8AO60658 829 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 HNRNPCP07910 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD109-202ENST00000422508 CDC27P30260 824 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 RUNX1T1Q06455 604 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TRIM71Q2Q1W2 868 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 LMBR1LQ6UX01 489 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TRMT1LQ7Z2T5 733 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 ZFP69BQ9UJL9 534 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 PRPSAP2O60256 369 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SLFN14P0C7P3 912 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SERPINB1P30740 379 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TXKP42681 527 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 COPS2P61201 443 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 KPNB1Q14974 876 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SETD3Q86TU7 594 aaPredicted RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 TRIM63Q969Q1 353 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 NCLNQ969V3 563 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 CHMP6Q96FZ7 201 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 WARS2Q9UGM6 360 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 AP4S1Q9Y587 144 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TCIRG1Q13488 830 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 LRRC8EQ6NSJ5 796 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TMC4Q7Z404 712 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 WDR11Q9BZH6 1224 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 PSTPIP2Q9H939 334 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 KIAA1586Q9HCI6 787 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 ADAMTS12P58397 1594 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 POLR2MP0CAP2 368 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 CAPRIN2Q6IMN6 1127 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 SPOPLQ6IQ16 392 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TRIM54Q9BYV2 358 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 NRBP2Q9NSY0 501 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 OLA1Q9NTK5 396 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 PCDHB4Q9Y5E5 795 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 WDR47O94967 919 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD109-202ENST00000422508 EIF6P56537 245 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 ZC3H12BQ5HYM0 836 aaKnown RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 HP1BP3Q5SSJ5 553 aaPredicted RBP9.94□□□□□ -0.82
CD109-202ENST00000422508 DNAJC24Q6P3W2 148 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SMYD2Q9NRG4 433 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SUFUQ9UMX1 484 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 EYA2O00167 538 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 PLS3P13797 630 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 IL1RL1Q01638 556 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 TFCP2Q12800 502 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 C1orf146Q5VVC0 180 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 C3orf20Q8ND61 904 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 PITPNM3Q9BZ71 974 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 ZNF556Q9HAH1 456 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 HACD3Q9P035 362 aa9.94□□□□□ -0.82
CD109-202ENST00000422508 YWHAHQ04917 246 aaPredicted RBP9.93□□□□□ -0.82
CD109-202ENST00000422508 TMED2Q15363 201 aa9.93□□□□□ -0.82
CD109-202ENST00000422508 RFX6Q8HWS3 928 aa9.93□□□□□ -0.82
CD109-202ENST00000422508 TDRD7Q8NHU6 1098 aaKnown RBP9.93□□□□□ -0.82
CD109-202ENST00000422508 TMEM245Q9H330 911 aa9.93□□□□□ -0.82
CD109-202ENST00000422508 ZNF229Q9UJW7 825 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms