RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 UBE2SQ16763 222 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 RTN1Q16799 776 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 ZNF618Q5T7W0 954 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 WWC2Q6AWC2 1192 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 FBXL16Q8N461 479 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 BRF1Q92994 677 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 ATP6V0A1Q93050 837 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 PCDHA6Q9UN73 950 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 PCDHA8Q9Y5H6 950 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 UBIAD1Q9Y5Z9 338 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 KLF18A0A0U1RQI7 1052 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 ABHD14A-ACY1A0A1B0GW23 586 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 GOLGA8BA8MQT2 603 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 KIF28PB7ZC32 967 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 hCG_1984214I3L0E3 225 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 MAFGO15525 162 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 TREHO43280 583 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 ATP9AO75110 1047 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 CAND2O75155 1236 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 GNAT1P11488 350 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 KCNA2P16389 499 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 IGFBP4P22692 258 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 THPOP40225 353 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 NAPAP54920 295 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 SP4Q02446 784 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 MTMR1Q13613 665 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 IKBKEQ14164 716 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 UTP14CQ5TAP6 766 aaKnown RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 ZNF713Q8N859 430 aaPredicted RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 RNPEPQ9H4A4 650 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 RIC8AQ9NPQ8 531 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
TRIM43CP-201ENST00000422468 RSPH10B2B2RC85 870 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 STXBP3O00186 592 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 TLL1O43897 1013 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 LGR5O75473 907 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 FOSP01100 380 aaPredicted RBP9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 RSPH10BP0C881 870 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 TCF7P36402 384 aaPredicted RBP9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 ADCY7P51828 1080 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 ADAM17P78536 824 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 DEFB103AP81534 67 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 FGD1P98174 961 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 TAP1Q03518 808 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 TCTN1Q2MV58 587 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 RUFY3Q7L099 469 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 PPM1EQ8WY54 764 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 SEPT1Q8WYJ6 367 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 GLT8D2Q9H1C3 349 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 JADE2Q9NQC1 790 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 BARHL2Q9NY43 387 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 WDR81Q562E7 1941 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 TTC28Q96AY4 2481 aa9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
TRIM43CP-201ENST00000422468 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 SIP14410 1827 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 NRCAMQ92823 1304 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 PRRC2BQ5JSZ5 2229 aaKnown RBP9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 GSTTP1A0A1W2PQM5 241 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 SMCO2A6NFE2 343 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 REC8O95072 547 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 GJB5O95377 273 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 POU3F3P20264 500 aaPredicted RBP9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 METAP2P50579 478 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 ARHGAP4P98171 946 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 PLEKHG4Q58EX7 1191 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 BLOC1S2Q6QNY1 142 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 LMBR1Q8WVP7 490 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 CRYGNQ8WXF5 182 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 PHKBQ93100 1093 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 PGBD1Q96JS3 809 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 RAD9AQ99638 391 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 MXRA8Q9BRK3 442 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 SMARCAD1Q9H4L7 1026 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 ERAP1Q9NZ08 941 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 PKD2L1Q9P0L9 805 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms