RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 KIAA1217Q5T5P2 1943 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 SOBPA7XYQ1 873 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 LGALS2P05162 132 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 RPLP2P05387 115 aaKnown RBP10.57□□□□□ -0.72
TRIM39-206ENST00000420746 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
TRIM39-206ENST00000420746 TGFB3P10600 412 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 SHC2P98077 582 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 PAN2Q504Q3 1202 aaKnown RBP10.57□□□□□ -0.72
TRIM39-206ENST00000420746 PPM1JQ5JR12 505 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 FBXO47Q5MNV8 452 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 LLGL2Q6P1M3 1020 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 SYTL5Q8TDW5 730 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-206ENST00000420746 CHMP4CQ96CF2 233 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 ACSF2Q96CM8 615 aaPredicted RBP10.57□□□□□ -0.72
TRIM39-206ENST00000420746 TAAR1Q96RJ0 339 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 DLGAP2Q9P1A6 1054 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 CDH22Q9UJ99 828 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 ANGPTL2Q9UKU9 493 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 HCFC2Q9Y5Z7 792 aa10.57□□□□□ -0.72
TRIM39-206ENST00000420746 TSPY2A6NKD2 308 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 GGPS1O95749 300 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 NR3C2P08235 984 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 SCG2P13521 617 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 ATAT1Q5SQI0 421 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 PLPP4Q5VZY2 271 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 XRRA1Q6P2D8 792 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 OTOP3Q7RTS5 596 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 FAM9BQ8IZU0 186 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
TRIM39-206ENST00000420746 KIF1BPQ96EK5 621 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 GPR20Q99678 358 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 TCF25Q9BQ70 676 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 SETD4Q9NVD3 440 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 COL20A1Q9P218 1284 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 IGSF9Q9P2J2 1179 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 PUF60Q9UHX1 559 aaKnown RBP10.56□□□□□ -0.72
TRIM39-206ENST00000420746 DBR1Q9UK59 544 aaKnown RBP10.56□□□□□ -0.72
TRIM39-206ENST00000420746 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
TRIM39-206ENST00000420746 ZFYVE26Q68DK2 2539 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 SLC30A4O14863 429 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 RFX1P22670 979 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 TGM1P22735 817 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 COL9A3Q14050 684 aaPredicted RBP10.55□□□□□ -0.72
TRIM39-206ENST00000420746 CEP85Q6P2H3 762 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 TMEM57Q8N5G2 664 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 NETO1Q8TDF5 533 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 LMBR1Q8WVP7 490 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
TRIM39-206ENST00000420746 APPBP2Q92624 585 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 TBC1D17Q9HA65 648 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 KCNK12Q9HB15 430 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 ENTPD7Q9NQZ7 604 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 ZNF215Q9UL58 517 aaPredicted RBP10.55□□□□□ -0.72
TRIM39-206ENST00000420746 PCDHGA2Q9Y5H1 932 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 FRYQ5TBA9 3013 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 ABCB11O95342 1321 aa10.55□□□□□ -0.72
TRIM39-206ENST00000420746 MYH7P12883 1935 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 KRBA1A5PL33 1030 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 HIDE1A8MVS5 230 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 STK25O00506 426 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 PROS1P07225 676 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 LAG3P18627 525 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 UBA1P22314 1058 aaKnown RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 PMLP29590 882 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 ARHGAP4P98171 946 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 SPOUT1Q5T280 376 aaKnown RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 RTN4RL1Q86UN2 441 aaPredicted RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 COLGALT1Q8NBJ5 622 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 NACAP1Q9BZK3 213 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 EPC1Q9H2F5 836 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 PXMP2Q9NR77 195 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 FBXO4Q9UKT5 387 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 USP18Q9UMW8 372 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRIM39-206ENST00000420746 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
TRIM39-206ENST00000420746 MYH7BA7E2Y1 1941 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 GPAA1O43292 621 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 NMT2O60551 498 aa10.53□□□□□ -0.72
TRIM39-206ENST00000420746 APPP05067 770 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms