RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TCF7P36402 384 aaPredicted RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 SYKP43405 635 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 GJA9P57773 515 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 NKX3-2P78367 333 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 IRX5P78411 483 aaPredicted RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 CYP4A11Q02928 519 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 ZRSR1Q15695 479 aaKnown RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 CCDC73Q6ZRK6 1079 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 TPH2Q8IWU9 490 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 FMR1NBQ8N0W7 255 aaPredicted RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 PDILTQ8N807 584 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 BANK1Q8NDB2 785 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 PLIN2Q99541 437 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 AP5M1Q9H0R1 490 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 GABBR1Q9UBS5 961 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 DDX20Q9UHI6 824 aaKnown RBP14□□□□□ -0.17
TMEM53-206ENST00000420706 KIAA1024Q9UPX6 916 aa14□□□□□ -0.17
TMEM53-206ENST00000420706 KDM3AQ9Y4C1 1321 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 POTEB3A0JP26 581 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 A6NJR5 290 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 CTAGE5O15320 804 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 POLR2DO15514 142 aaKnown RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 NR1I2O75469 434 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 LYPLA2O95372 231 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 MMP3P08254 477 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 HOXD8P13378 290 aaPredicted RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 PSMC5P62195 406 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 E2F4Q16254 413 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 UGCGQ16739 394 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 POTEBQ6S5H4 581 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 C4orf19Q8IY42 314 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 KCTD17Q8N5Z5 321 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 LRRC15Q8TF66 581 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 CDK5RAP3Q96JB5 506 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 LXNQ9BS40 222 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 UPF3AQ9H1J1 476 aaKnown RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 ZNF302Q9NR11 478 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
TMEM53-206ENST00000420706 WDR81Q562E7 1941 aa13.99□□□□□ -0.17
TMEM53-206ENST00000420706 A0A087WWV3 80 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 E9PMD0 336 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 BACH1O14867 736 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 MSCO60682 206 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 DKC1O60832 514 aaKnown RBP eCLIP13.98□□□□□ -0.17
TMEM53-206ENST00000420706 STBD1O95210 358 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 MBD3O95983 291 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 PLCG1P19174 1290 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 ATP4AP20648 1035 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 STAT5BP51692 787 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 PSMC6P62333 389 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 BEX3Q00994 111 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 MTFR1Q15390 333 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 DGKDQ16760 1214 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 NAALADL2Q58DX5 795 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 FAM160B1Q5W0V3 765 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 LHX8Q68G74 356 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 IQUBQ8NA54 791 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 RASSF8Q8NHQ8 419 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 DHX58Q96C10 678 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 PYM1Q9BRP8 204 aaKnown RBP13.98□□□□□ -0.17
TMEM53-206ENST00000420706 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.98□□□□□ -0.17
TMEM53-206ENST00000420706 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 BLOC1S4Q9NUP1 217 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 DDX19AQ9NUU7 478 aaKnown RBP13.98□□□□□ -0.17
TMEM53-206ENST00000420706 SERTAD1Q9UHV2 236 aa13.98□□□□□ -0.17
TMEM53-206ENST00000420706 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 SYNRGQ9UMZ2 1314 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 ZBTB39O15060 712 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 ZNF862O60290 1169 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 PGK1P00558 417 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 LGALS2P05162 132 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
TMEM53-206ENST00000420706 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
TMEM53-206ENST00000420706 STAT6P42226 847 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 CPT1AP50416 773 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 FSCN1Q16658 493 aaKnown RBP13.97□□□□□ -0.17
TMEM53-206ENST00000420706 BRDTQ58F21 947 aaPredicted RBP13.97□□□□□ -0.17
TMEM53-206ENST00000420706 PDXDC2PQ6P474 469 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 KLHDC9Q8NEP7 349 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 TIGD1Q96MW7 591 aa13.97□□□□□ -0.17
TMEM53-206ENST00000420706 NACC1Q96RE7 527 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms