RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ATG7O95352 703 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 CTSHP09668 335 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 FAM86B2P0C5J1 330 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 POU3F3P20264 500 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-206ENST00000420121 MARK3P27448 753 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
SSBP3-206ENST00000420121 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 FGD1P98174 961 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 MGAT3Q09327 533 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 JAKMIP3Q5VZ66 844 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 NCOA5Q9HCD5 579 aaKnown RBP12.61□□□□□ -0.39
SSBP3-206ENST00000420121 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-206ENST00000420121 ERAP1Q9NZ08 941 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 RALGAPA2Q2PPJ7 1873 aa12.61□□□□□ -0.39
SSBP3-206ENST00000420121 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-206ENST00000420121 DHX15O43143 795 aaKnown RBP12.6□□□□□ -0.39
SSBP3-206ENST00000420121 TLL1O43897 1013 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 LPXNO60711 386 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 EFCAB14O75071 495 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 CCNE2O96020 404 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 CHRNA1P02708 482 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 CYP3A4P08684 503 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 GNAT1P11488 350 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 IFNAR1P17181 557 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 IGFBP4P22692 258 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 PSMA5P28066 241 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 ACTR2P61160 394 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 PPFIA1Q13136 1202 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 IKBKEQ14164 716 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 GRIK4Q16099 956 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 NIPA1Q7RTP0 329 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 ZBTB10Q96DT7 871 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-206ENST00000420121 GLT8D2Q9H1C3 349 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 SMARCAD1Q9H4L7 1026 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 TTC3P53804 2025 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
SSBP3-206ENST00000420121 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 KIF28PB7ZC32 967 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 INSRRP14616 1297 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
SSBP3-206ENST00000420121 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-206ENST00000420121 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-206ENST00000420121 KRT40Q6A162 431 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 GLG1Q92896 1179 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 RAD9AQ99638 391 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 TM6SF1Q9BZW5 370 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 TUBE1Q9UJT0 475 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 KIAA1671Q9BY89 1806 aa12.59□□□□□ -0.39
SSBP3-206ENST00000420121 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
SSBP3-206ENST00000420121 NCOR1O75376 2440 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 GRB10Q13322 594 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 TAF2Q6P1X5 1199 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 ABHD15Q6UXT9 468 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 REXO1Q8N1G1 1221 aaKnown RBP12.58□□□□□ -0.4
SSBP3-206ENST00000420121 SP7Q8TDD2 431 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-206ENST00000420121 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 ARNTL2Q8WYA1 636 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 LENG9Q96B70 501 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 SDF4Q9BRK5 362 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
SSBP3-206ENST00000420121 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 UPF3BQ9BZI7 483 aaKnown RBP12.58□□□□□ -0.4
SSBP3-206ENST00000420121 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
SSBP3-206ENST00000420121 CIITAP33076 1130 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 ERVK-21P61565 698 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 LPIN1Q14693 890 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 NPY5RQ15761 445 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-206ENST00000420121 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 DNAJB3Q8WWF6 145 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 SEPT8Q92599 483 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 TOP1MTQ969P6 601 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 ZBED2Q9BTP6 218 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 C6orf50Q9HD87 102 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 VPS54Q9P1Q0 977 aa12.57□□□□□ -0.4
SSBP3-206ENST00000420121 RRN3P2A6NIE6 340 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 ZBTB42B2RXF5 422 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 DDX39AO00148 427 aaKnown RBP12.56□□□□□ -0.4
SSBP3-206ENST00000420121 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
SSBP3-206ENST00000420121 AMHP03971 560 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 NEFLP07196 543 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 GHRP10912 638 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 ATP4AP20648 1035 aa12.56□□□□□ -0.4
SSBP3-206ENST00000420121 STAT5BP51692 787 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms