RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
CHCHD4-203ENST00000420103 hCG_1642624A0A1W2PR95 340 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 FIBPO43427 364 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 DDAH1O94760 285 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 KCNA2P16389 499 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 ADAM15Q13444 863 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 APBB2Q92870 758 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 MSLNLQ96KJ4 702 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 PCYT2Q99447 389 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 CLEC1BQ9P126 229 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 PLAGL2Q9UPG8 496 aa13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 MRPL42Q9Y6G3 142 aaKnown RBP13.49□□□□□ -0.25
CHCHD4-203ENST00000420103 NRCAMQ92823 1304 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 DGKIO75912 1065 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 ITGB1P05556 798 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 RB1P06400 928 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 GNAT1P11488 350 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 ITGB5P18084 799 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 CD52P31358 61 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 ANO2Q9NQ90 1003 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CHCHD4-203ENST00000420103 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 GLP2RO95838 553 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 MMP1P03956 469 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 PPFIA1Q13136 1202 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 GRIK4Q16099 956 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 SPPL3Q8TCT6 385 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 TRAPPC12Q8WVT3 735 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 TCEANC2Q96MN5 208 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 C11orf84Q9BUA3 381 aaPredicted RBP13.47□□□□□ -0.25
CHCHD4-203ENST00000420103 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 TTC3P53804 2025 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 CCDC69A6NI79 296 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 STXBP3O00186 592 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 STAM2O75886 525 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 MCM5P33992 734 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 IGBP1P78318 339 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 SMAD4Q13485 552 aaKnown RBP13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 UBE2SQ16763 222 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 MICU3Q86XE3 530 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 MAP3K14Q99558 947 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 LMAN2LQ9H0V9 348 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 TUBE1Q9UJT0 475 aa13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 ZNF215Q9UL58 517 aaPredicted RBP13.46□□□□□ -0.25
CHCHD4-203ENST00000420103 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 EYA4O95677 639 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 INSRRP14616 1297 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 EDAQ92838 391 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
CHCHD4-203ENST00000420103 CNTNAP5Q8WYK1 1306 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 NCK2O43639 380 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 MGEA5O60502 916 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 KIF5BP33176 963 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 NRIP1P48552 1158 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 MRPS6P82932 125 aaKnown RBP13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 TRAF1Q13077 416 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 TMEM266Q2M3C6 531 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 ADCK5Q3MIX3 580 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 TAF2Q6P1X5 1199 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 TMTC3Q6ZXV5 915 aa13.44□□□□□ -0.26
CHCHD4-203ENST00000420103 CYP2W1Q8TAV3 490 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms