RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RNF135Q8IUD6 432 aa16.42■□□□□ 0.22
NFE4-201ENST00000420058 SPPL3Q8TCT6 385 aa16.42■□□□□ 0.22
NFE4-201ENST00000420058 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
NFE4-201ENST00000420058 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
NFE4-201ENST00000420058 IGFLR1Q9H665 355 aa16.42■□□□□ 0.22
NFE4-201ENST00000420058 CLEC1BQ9P126 229 aa16.42■□□□□ 0.22
NFE4-201ENST00000420058 DMDP11532 3685 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 EYA4O95677 639 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 MMP1P03956 469 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
NFE4-201ENST00000420058 BTG3Q14201 252 aaPredicted RBP16.41■□□□□ 0.22
NFE4-201ENST00000420058 ADGRD2Q7Z7M1 963 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 PCYT2Q99447 389 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 PLVAPQ9BX97 442 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 CDY2AQ9Y6F7 541 aa16.41■□□□□ 0.22
NFE4-201ENST00000420058 MRPL42Q9Y6G3 142 aaKnown RBP16.41■□□□□ 0.22
NFE4-201ENST00000420058 E7EWF7 191 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 ITGB1P05556 798 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
NFE4-201ENST00000420058 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 AAMPQ13685 434 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 WTAPQ15007 396 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 GRIK4Q16099 956 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 SEPT1Q8WYJ6 367 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 EDAQ92838 391 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 CD207Q9UJ71 328 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 MYO15AQ9UKN7 3530 aa16.4■□□□□ 0.22
NFE4-201ENST00000420058 STXBP3O00186 592 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 MARK3P27448 753 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 PDE4AP27815 886 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 CD52P31358 61 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 TRDNQ13061 729 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
NFE4-201ENST00000420058 IER5LQ5T953 404 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 TSHZ1Q6ZSZ6 1077 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 MB21D2Q8IYB1 491 aaPredicted RBP16.39■□□□□ 0.21
NFE4-201ENST00000420058 P2RX5Q93086 422 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 SPZ1Q9BXG8 430 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
NFE4-201ENST00000420058 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
NFE4-201ENST00000420058 CSPG5O95196 566 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 INSRRP14616 1297 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 MRPS6P82932 125 aaKnown RBP16.38■□□□□ 0.21
NFE4-201ENST00000420058 BMP8AQ7Z5Y6 402 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
NFE4-201ENST00000420058 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 GIMAP8Q8ND71 665 aaPredicted RBP16.38■□□□□ 0.21
NFE4-201ENST00000420058 PRSS33Q8NF86 280 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 MFSD14AQ96MC6 490 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 ERAP1Q9NZ08 941 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
NFE4-201ENST00000420058 LOC730098B7Z3J9 87 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 GLP2RO95838 553 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 GATMP50440 423 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 CBX2Q14781 532 aaPredicted RBP16.37■□□□□ 0.21
NFE4-201ENST00000420058 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
NFE4-201ENST00000420058 EFHBQ8N7U6 833 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 SMRP1Q8NCR6 262 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 NCOA7Q8NI08 942 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
NFE4-201ENST00000420058 TMX1Q9H3N1 280 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 SQORQ9Y6N5 450 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 SPTBN4Q9H254 2564 aa16.37■□□□□ 0.21
NFE4-201ENST00000420058 PTPRZ1P23471 2315 aaPredicted RBP16.36■□□□□ 0.21
NFE4-201ENST00000420058 ERICH2A1L162 156 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 PLEKHA8P1O95397 391 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 CHMLP26374 656 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 COASYQ13057 564 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 TRIM67Q6ZTA4 783 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 POF1BQ8WVV4 589 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 CUL5Q93034 780 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 RRP36Q96EU6 259 aaKnown RBP16.36■□□□□ 0.21
NFE4-201ENST00000420058 SMARCAD1Q9H4L7 1026 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 PADI3Q9ULW8 664 aa16.36■□□□□ 0.21
NFE4-201ENST00000420058 RIF1Q5UIP0 2472 aaKnown RBP16.35■□□□□ 0.21
NFE4-201ENST00000420058 IGBP1P78318 339 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 TTC22Q5TAA0 569 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 CMTR1Q8N1G2 835 aaKnown RBP16.35■□□□□ 0.21
NFE4-201ENST00000420058 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 TRAPPC12Q8WVT3 735 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 GLG1Q92896 1179 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 FAM49AQ9H0Q0 323 aaPredicted RBP16.35■□□□□ 0.21
NFE4-201ENST00000420058 PSTPIP2Q9H939 334 aa16.35■□□□□ 0.21
NFE4-201ENST00000420058 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms