RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 TOP1MTQ969P6 601 aa23.27■■□□□ 1.32
MCF2L-212ENST00000420013 AZI2Q9H6S1 392 aa23.27■■□□□ 1.32
MCF2L-212ENST00000420013 PKD2L1Q9P0L9 805 aa23.27■■□□□ 1.32
MCF2L-212ENST00000420013 BDP1A6H8Y1 2624 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 ESYT2A0FGR8 921 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 MARK3P27448 753 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 MGAT3Q09327 533 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 KRT40Q6A162 431 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-212ENST00000420013 YME1L1Q96TA2 773 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 SUGCTQ9HAC7 445 aa23.26■■□□□ 1.31
MCF2L-212ENST00000420013 FAM217BQ9NTX9 383 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-212ENST00000420013 V9GY48 417 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-212ENST00000420013 TCF20Q9UGU0 1960 aaKnown RBP23.26■■□□□ 1.31
MCF2L-212ENST00000420013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-212ENST00000420013 SMCO2A6NFE2 343 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 CDC27P30260 824 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 SLC26A2P50443 739 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 PFKFB3Q16875 520 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-212ENST00000420013 FBXL16Q8N461 479 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 FBXO22Q8NEZ5 403 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 LOXHD1Q8IVV2 1947 aa23.25■■□□□ 1.31
MCF2L-212ENST00000420013 MYH9P35579 1960 aaKnown RBP23.24■■□□□ 1.31
MCF2L-212ENST00000420013 SCG2P13521 617 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 HSPA4P34932 840 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 BLOC1S2Q6QNY1 142 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 RUFY4Q6ZNE9 571 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 PLPPR4Q7Z2D5 763 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 HLA-CQ95604 372 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 MTUS1Q9ULD2 1270 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 TTC3P53804 2025 aa23.24■■□□□ 1.31
MCF2L-212ENST00000420013 MEIS1O00470 390 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 REC8O95072 547 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 CHRNA1P02708 482 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 GHRP10912 638 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 ACTR2P61160 394 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 TFF2Q03403 129 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 TSHZ1Q6ZSZ6 1077 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 PGBD1Q96JS3 809 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
MCF2L-212ENST00000420013 PCYT2Q99447 389 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 AGXT2Q9BYV1 514 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 AGO4Q9HCK5 861 aaKnown RBP23.23■■□□□ 1.31
MCF2L-212ENST00000420013 NAP1L2Q9ULW6 460 aaPredicted RBP23.23■■□□□ 1.31
MCF2L-212ENST00000420013 SQORQ9Y6N5 450 aa23.23■■□□□ 1.31
MCF2L-212ENST00000420013 EPB41L2O43491 1005 aaKnown RBP23.22■■□□□ 1.31
MCF2L-212ENST00000420013 BMP1P13497 986 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 MRPS6P82932 125 aaKnown RBP23.22■■□□□ 1.31
MCF2L-212ENST00000420013 SETQ01105 290 aaPredicted RBP23.22■■□□□ 1.31
MCF2L-212ENST00000420013 MARCH8Q5T0T0 291 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 C17orf80Q9BSJ5 609 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 OSBPL7Q9BZF2 842 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 ZMYND12Q9H0C1 365 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 TRPC6Q9Y210 931 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 SNX14Q9Y5W7 946 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 CDY2AQ9Y6F7 541 aa23.22■■□□□ 1.31
MCF2L-212ENST00000420013 WDR81Q562E7 1941 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 M0QZ92 97 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 ATG7O95352 703 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 NEFLP07196 543 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 ARP10275 920 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 INSRRP14616 1297 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 ZNF76P36508 570 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 APOBRQ0VD83 1088 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 ITGB3BPQ13352 177 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-212ENST00000420013 LPIN1Q14693 890 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 PTPROQ16827 1216 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 FBXO47Q5MNV8 452 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 FAM43BQ6ZT52 329 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-212ENST00000420013 Q6ZUG5 572 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 CYP2W1Q8TAV3 490 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 DNAJB3Q8WWF6 145 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 BRF1Q92994 677 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 ATG2AQ2TAZ0 1938 aa23.21■■□□□ 1.31
MCF2L-212ENST00000420013 COL1A2P08123 1366 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 CYP3A4P08684 503 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 RPS6KB1P23443 525 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 PSMA5P28066 241 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 ADD1P35611 737 aaKnown RBP23.2■■□□□ 1.3
MCF2L-212ENST00000420013 STAT5BP51692 787 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 IGBP1P78318 339 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 PLCB4Q15147 1175 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 EPC2Q52LR7 807 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 TIGD5Q53EQ6 642 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 IER5Q5VY09 327 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 REXO1Q8N1G1 1221 aaKnown RBP23.2■■□□□ 1.3
MCF2L-212ENST00000420013 CCDC148Q8NFR7 591 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 CRYGNQ8WXF5 182 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 MRPL38Q96DV4 380 aaKnown RBP23.2■■□□□ 1.3
MCF2L-212ENST00000420013 C6orf50Q9HD87 102 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 RWDD3Q9Y3V2 267 aa23.2■■□□□ 1.3
MCF2L-212ENST00000420013 ADGRA3Q8IWK6 1321 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 IGKV6D-21A0A0A0MT36 114 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 UPP2O95045 317 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 GNA11P29992 359 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 KCNQ1P51787 676 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 FAM160B1Q5W0V3 765 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 FTHL17Q9BXU8 183 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 RNF26Q9BY78 433 aaPredicted RBP23.19■■□□□ 1.3
MCF2L-212ENST00000420013 TMEM260Q9NX78 707 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms