RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 E9PMD0 336 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
SEC24D-202ENST00000419654 SREBF1P36956 1147 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 ARHGAP4P98171 946 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 SPA17Q15506 151 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.88■□□□□ 0.29
SEC24D-202ENST00000419654 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
SEC24D-202ENST00000419654 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 POTEB2H3BUK9 544 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 BUB1O43683 1085 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 AKR1B10O60218 316 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 STAT3P40763 770 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 KRT79Q5XKE5 535 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 COG1Q8WTW3 980 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
SEC24D-202ENST00000419654 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
SEC24D-202ENST00000419654 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 USP14P54578 494 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 GFPT1Q06210 699 aaPredicted RBP16.87■□□□□ 0.29
SEC24D-202ENST00000419654 UNC13DQ70J99 1090 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 HNRNPLLQ8WVV9 542 aaKnown RBP16.87■□□□□ 0.29
SEC24D-202ENST00000419654 RAD54LQ92698 747 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 EIF3CLB5ME19 914 aaKnown RBP16.87■□□□□ 0.29
SEC24D-202ENST00000419654 KIF11P52732 1056 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 NAP1L1P55209 391 aaKnown RBP16.87■□□□□ 0.29
SEC24D-202ENST00000419654 SLC7A5Q01650 507 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 NFRKBQ6P4R8 1299 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 HDAC7Q8WUI4 952 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 EIF3CQ99613 913 aaKnown RBP16.87■□□□□ 0.29
SEC24D-202ENST00000419654 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 NUP58Q9BVL2 599 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 SALL4Q9UJQ4 1053 aa16.87■□□□□ 0.29
SEC24D-202ENST00000419654 TRAF5O00463 557 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 TUBB2AQ13885 445 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
SEC24D-202ENST00000419654 SCYL3Q8IZE3 742 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 TUBB2BQ9BVA1 445 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 SIK3Q9Y2K2 1263 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 PCDHA13Q9Y5I0 950 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
SEC24D-202ENST00000419654 Q4G0T1 1027 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 DNAAF5Q86Y56 855 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 WDR18Q9BV38 432 aa16.86■□□□□ 0.29
SEC24D-202ENST00000419654 MRPL11Q9Y3B7 192 aaKnown RBP16.86■□□□□ 0.29
SEC24D-202ENST00000419654 ABCB11O95342 1321 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 CYP3A4P08684 503 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 CIITAP33076 1130 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 VAV2P52735 878 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 SEMA3FQ13275 785 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 PAPD7Q5XG87 772 aaKnown RBP16.85■□□□□ 0.29
SEC24D-202ENST00000419654 CACNA2D4Q7Z3S7 1137 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 PRPF38AQ8NAV1 312 aaKnown RBP16.85■□□□□ 0.29
SEC24D-202ENST00000419654 PCDHA12Q9UN75 941 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 POTECB2RU33 542 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 PTPROQ16827 1216 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 CCDC40Q4G0X9 1142 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 LENG9Q96B70 501 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
SEC24D-202ENST00000419654 POLR2AP24928 1970 aaKnown RBP16.85■□□□□ 0.29
SEC24D-202ENST00000419654 ZNF536O15090 1300 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
SEC24D-202ENST00000419654 COASYQ13057 564 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 GPS2Q13227 327 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 ETNPPLQ8TBG4 499 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 ZKSCAN4Q969J2 545 aaPredicted RBP16.84■□□□□ 0.29
SEC24D-202ENST00000419654 WRNIP1Q96S55 665 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 STK17AQ9UEE5 414 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 PHIPQ8WWQ0 1821 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 MEIS1O00470 390 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
SEC24D-202ENST00000419654 ICAM1P05362 532 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 RNASE9P60153 205 aaKnown RBP16.84■□□□□ 0.29
SEC24D-202ENST00000419654 DGKZQ13574 1117 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 MTMR2Q13614 643 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 ZSCAN26Q16670 478 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 MAN2A1Q16706 1144 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 LRRC55Q6ZSA7 311 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 CCDC170Q8IYT3 715 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 BCAS3Q9H6U6 928 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
SEC24D-202ENST00000419654 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.29
SEC24D-202ENST00000419654 TBX3O15119 743 aa16.83■□□□□ 0.29
SEC24D-202ENST00000419654 CFBP00751 764 aa16.83■□□□□ 0.29
SEC24D-202ENST00000419654 POLR2MP0CAP2 368 aa16.83■□□□□ 0.29
SEC24D-202ENST00000419654 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.293e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms