RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 DEFB118Q96PH6 123 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 TSEN34Q9BSV6 310 aaKnown RBP7.67□□□□□ -1.18
LINC02539-202ENST00000419220 ZMYND12Q9H0C1 365 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 PAK6Q9NQU5 681 aaPredicted RBP7.67□□□□□ -1.18
LINC02539-202ENST00000419220 PXMP2Q9NR77 195 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 TPCN1Q9ULQ1 816 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 MRVI1Q9Y6F6 885 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 CNTNAP5Q8WYK1 1306 aa7.67□□□□□ -1.18
LINC02539-202ENST00000419220 RBBP6Q7Z6E9 1792 aaKnown RBP7.66□□□□□ -1.18
LINC02539-202ENST00000419220 CCDC194A0A1B0GVG4 234 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 H3BQV1 296 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 MARCH6O60337 910 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 TXNP10599 105 aaKnown RBP7.66□□□□□ -1.18
LINC02539-202ENST00000419220 CYBAP13498 195 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 EIF2AK2P19525 551 aaKnown RBP7.66□□□□□ -1.18
LINC02539-202ENST00000419220 USP11P51784 963 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 SCRN1Q12765 414 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 CCL14Q16627 93 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 ME3Q16798 604 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PCNX4Q63HM2 1172 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 RASGRP2Q7LDG7 609 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 KRT25Q7Z3Z0 450 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 MORC4Q8TE76 937 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PHKBQ93100 1093 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 TAAR1Q96RJ0 339 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 ALG1Q9BT22 464 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 WDR11Q9BZH6 1224 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 MLXIPQ9HAP2 919 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 NCOA5Q9HCD5 579 aaKnown RBP7.66□□□□□ -1.18
LINC02539-202ENST00000419220 XPNPEP3Q9NQH7 507 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PRKAG2Q9UGJ0 569 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PCDHA6Q9UN73 950 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PCDHA4Q9UN74 947 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 SMC3Q9UQE7 1217 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 PCDHA8Q9Y5H6 950 aa7.66□□□□□ -1.18
LINC02539-202ENST00000419220 CARNS1A5YM72 827 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 STXBP3O00186 592 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 DNM1LO00429 736 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 NOP56O00567 594 aaKnown RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 FIBPO43427 364 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 BAG4O95429 457 aaKnown RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 GH1P01241 217 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 C6orf222P0C671 652 aaPredicted RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 HOXA13P31271 388 aaPredicted RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 KRT2P35908 639 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 SETQ01105 290 aaPredicted RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 PGM5Q15124 567 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 MTFR1Q15390 333 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 NTRK3Q16288 839 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 DUSP28Q4G0W2 176 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 MROH7Q68CQ1 1323 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 SLC30A10Q6XR72 485 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 SEPT14Q6ZU15 432 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
LINC02539-202ENST00000419220 BLIDQ8IZY5 108 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 GPRASP2Q96D09 838 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 C8orf76Q96K31 380 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 GLT1D1Q96MS3 346 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 SDF4Q9BRK5 362 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 PDCD2LQ9BRP1 358 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 KATNAL1Q9BW62 490 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 FLRT1Q9NZU1 646 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 OGDHLQ9ULD0 1010 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 NR2E3Q9Y5X4 410 aa7.65□□□□□ -1.18
LINC02539-202ENST00000419220 hCG_1642624A0A1W2PR95 340 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 RBM47A0AV96 593 aaKnown RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 MEIS2O14770 477 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 DYNC1LI2O43237 492 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 PPP1R11O60927 126 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 FARP2O94887 1054 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 SNAI1O95863 264 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 ZNF865P0CJ78 1059 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 EDNRBP24530 442 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 CCND3P30281 292 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 GJA9P57773 515 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 SKOR1P84550 965 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 MLLT1Q03111 559 aaPredicted RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 MTMR1Q13613 665 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 NONOQ15233 471 aaKnown RBP eCLIP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 DGKDQ16760 1214 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 USP17L6PQ6QN14 398 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 EEPD1Q7L9B9 569 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 NIPA1Q7RTP0 329 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 TLK2Q86UE8 772 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 CCDC83Q8IWF9 413 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 OR6J1Q8NGC5 347 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 SENP7Q9BQF6 1050 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 C11orf49Q9H6J7 331 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 TBC1D22BQ9NU19 505 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 NOL7Q9UMY1 257 aaKnown RBP7.64□□□□□ -1.19
LINC02539-202ENST00000419220 ZSWIM8A7E2V4 1837 aa7.64□□□□□ -1.19
LINC02539-202ENST00000419220 SMCHD1A6NHR9 2005 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms