RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CCNE2O96020 404 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 MYOGP15173 224 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 USP11P51784 963 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 AK2P54819 239 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 TCTN1Q2MV58 587 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 FAM26DQ5JW98 314 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 MARCH8Q5T0T0 291 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 GALNT17Q6IS24 598 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 TAF2Q6P1X5 1199 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 ABHD15Q6UXT9 468 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 RPAINQ86UA6 219 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 SLC17A8Q8NDX2 589 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 C22orf23Q9BZE7 217 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 TET1Q8NFU7 2136 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 MBLAC1A4D2B0 266 aaPredicted RBP18.7■□□□□ 0.58
LINC00404-201ENST00000418660 KIF28PB7ZC32 967 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 SEC24BO95487 1268 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 CTSHP09668 335 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 INSRRP14616 1297 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 SLC26A2P50443 739 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 PLCB4Q15147 1175 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 PRR16Q569H4 304 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 PLEKHG4Q58EX7 1191 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 PPP2R2DQ66LE6 453 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 BLIDQ8IZY5 108 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 DAGLBQ8NCG7 672 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 DBF4BQ8NFT6 615 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 MAFAQ8NHW3 353 aaPredicted RBP18.7■□□□□ 0.58
LINC00404-201ENST00000418660 TUBE1Q9UJT0 475 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 TRPC6Q9Y210 931 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 STK36Q9NRP7 1315 aa18.7■□□□□ 0.58
LINC00404-201ENST00000418660 EDIL3O43854 480 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 FAM160B1Q5W0V3 765 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 ZNF746Q6NUN9 644 aaPredicted RBP18.69■□□□□ 0.58
LINC00404-201ENST00000418660 MIS18BP1Q6P0N0 1132 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 RUFY4Q6ZNE9 571 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 RSPH3Q86UC2 560 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 LENG9Q96B70 501 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 UIMC1Q96RL1 719 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 PRDM12Q9H4Q4 367 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 GBF1Q92538 1859 aa18.69■□□□□ 0.58
LINC00404-201ENST00000418660 M0R2N6 131 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 BACH1O14867 736 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 RPLP2P05387 115 aaKnown RBP18.68■□□□□ 0.58
LINC00404-201ENST00000418660 CA3P07451 260 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 IGBP1P78318 339 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 DEFB103AP81534 67 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 SEPT8Q92599 483 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 GAS2L1Q99501 681 aaPredicted RBP18.68■□□□□ 0.58
LINC00404-201ENST00000418660 ZNF302Q9NR11 478 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 TCEAL9Q9UHQ7 104 aa18.68■□□□□ 0.58
LINC00404-201ENST00000418660 POTEB3A0JP26 581 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 TLL1O43897 1013 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 CHRNA1P02708 482 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 XBP1P17861 261 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 NEK4P51957 841 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 KRT76Q01546 638 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 MKRN4PQ13434 485 aaPredicted RBP18.67■□□□□ 0.58
LINC00404-201ENST00000418660 NPY5RQ15761 445 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 SWSAP1Q6NVH7 229 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 POTEBQ6S5H4 581 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 CCDC60Q8IWA6 550 aaPredicted RBP18.67■□□□□ 0.58
LINC00404-201ENST00000418660 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
LINC00404-201ENST00000418660 DNAJB3Q8WWF6 145 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 ZBED2Q9BTP6 218 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 OSBPL7Q9BZF2 842 aa18.67■□□□□ 0.58
LINC00404-201ENST00000418660 HBP1O60381 514 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 CTDNEP1O95476 244 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 MGAT3Q09327 533 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 ME3Q16798 604 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 PDXDC2PQ6P474 469 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 TMCO2Q7Z6W1 182 aaPredicted RBP18.66■□□□□ 0.58
LINC00404-201ENST00000418660 ATP8B4Q8TF62 1192 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 KCNJ14Q9UNX9 436 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 PCDHA2Q9Y5H9 948 aa18.66■□□□□ 0.58
LINC00404-201ENST00000418660 CYP3A7-CYP3A51PA0A087WV96 503 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 RBAK-RBAKDNI3L0D1 243 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 MSH4O15457 936 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 GJB5O95377 273 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 AMHP03971 560 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 PSAPP07602 524 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 CYP3A7P24462 503 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 NONOQ15233 471 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC00404-201ENST00000418660 Q4G0T1 1027 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC00404-201ENST00000418660 KRT25Q7Z3Z0 450 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 NECAB1Q8N987 351 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 TRAPPC12Q8WVT3 735 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 WASF1Q92558 559 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 APBB2Q92870 758 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 SLC5A5Q92911 643 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 RIT2Q99578 217 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 ORC3Q9UBD5 711 aaPredicted RBP18.65■□□□□ 0.58
LINC00404-201ENST00000418660 PCDHA10Q9Y5I2 948 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 MAFBQ9Y5Q3 323 aaPredicted RBP18.65■□□□□ 0.58
LINC00404-201ENST00000418660 COL1A2P08123 1366 aa18.65■□□□□ 0.58
LINC00404-201ENST00000418660 KAT6AQ92794 2004 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms