RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TMEM39AQ9NV64 488 aa21.07■□□□□ 0.96
PTCD3-204ENST00000418628 MAFBQ9Y5Q3 323 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-204ENST00000418628 NEMFO60524 1076 aa21.06■□□□□ 0.96
PTCD3-204ENST00000418628 SFNP31947 248 aa21.06■□□□□ 0.96
PTCD3-204ENST00000418628 JAK3P52333 1124 aa21.06■□□□□ 0.96
PTCD3-204ENST00000418628 MIS18BP1Q6P0N0 1132 aa21.06■□□□□ 0.96
PTCD3-204ENST00000418628 DHX38Q92620 1227 aaKnown RBP21.06■□□□□ 0.96
PTCD3-204ENST00000418628 PRDM5Q9NQX1 630 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-204ENST00000418628 PCDHA10Q9Y5I2 948 aa21.06■□□□□ 0.96
PTCD3-204ENST00000418628 TIMP1P01033 207 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 ATP4AP20648 1035 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 PDCP20941 246 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 MAGEA10P43363 369 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-204ENST00000418628 STAT5BP51692 787 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 PLCB4Q15147 1175 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 PTGISQ16647 500 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 TRIM71Q2Q1W2 868 aaKnown RBP21.05■□□□□ 0.96
PTCD3-204ENST00000418628 SLFN12Q8IYM2 578 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 LMBR1Q8WVP7 490 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 GLG1Q92896 1179 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 TMEM60Q9H2L4 133 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 DISC1Q9NRI5 854 aa21.05■□□□□ 0.96
PTCD3-204ENST00000418628 UMODL1Q5DID0 1318 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 MBLAC1A4D2B0 266 aaPredicted RBP21.04■□□□□ 0.96
PTCD3-204ENST00000418628 H3BQV1 296 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 PITPNM1O00562 1244 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 PSAPP07602 524 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 SYT1P21579 422 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 TTC38Q5R3I4 469 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 FAM160B1Q5W0V3 765 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 SERINC5Q86VE9 423 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 WNT8BQ93098 351 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 WNT8AQ9H1J5 351 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 ZNF302Q9NR11 478 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 PRKAG2Q9UGJ0 569 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 TCEAL9Q9UHQ7 104 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 NRCAMQ92823 1304 aa21.04■□□□□ 0.96
PTCD3-204ENST00000418628 C17orf102A2RUQ5 167 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 EML1O00423 815 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 ZNF862O60290 1169 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 CYP2C9P11712 490 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 MARK3P27448 753 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 BMP8BP34820 402 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 ZNF200P98182 395 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-204ENST00000418628 GNL2Q13823 731 aaKnown RBP21.03■□□□□ 0.96
PTCD3-204ENST00000418628 CALCRLQ16602 461 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 UGCGQ16739 394 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 C4orf32Q8N8J7 132 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 ATP8B4Q8TF62 1192 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 HIPK3Q9H422 1215 aa21.03■□□□□ 0.96
PTCD3-204ENST00000418628 NOL7Q9UMY1 257 aaKnown RBP21.03■□□□□ 0.96
PTCD3-204ENST00000418628 COL1A2P08123 1366 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 ZBTB42B2RXF5 422 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 CHMP2AO43633 222 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 RAG1P15918 1043 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 MCM7P33993 719 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 CHMP4BP1P59074 171 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 PPFIA1Q13136 1202 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 PTK7Q13308 1070 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 NBR1Q14596 966 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 MARCH8Q5T0T0 291 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 SWSAP1Q6NVH7 229 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 MIER3Q7Z3K6 550 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 CAGE1Q8TC20 777 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 BADQ92934 168 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 VWCEQ96DN2 955 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.02■□□□□ 0.96
PTCD3-204ENST00000418628 SETD4Q9NVD3 440 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 PCDHB6Q9Y5E3 794 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 MYH11P35749 1972 aa21.02■□□□□ 0.96
PTCD3-204ENST00000418628 LAMA3Q16787 3333 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 BACH1O14867 736 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 TREHO43280 583 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 GRIK4Q16099 956 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 RILPL1Q5EBL4 403 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 MCTP1Q6DN14 999 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 PDXDC2PQ6P474 469 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 TRAF7Q6Q0C0 670 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 BRAPQ7Z569 592 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 GABBR1Q9UBS5 961 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 MTMR6Q9Y217 621 aa21.01■□□□□ 0.95
PTCD3-204ENST00000418628 POTEB3A0JP26 581 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 STBD1O95210 358 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 BAG4O95429 457 aaKnown RBP21■□□□□ 0.95
PTCD3-204ENST00000418628 INSRRP14616 1297 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 CYP2C18P33260 490 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 MDM2Q00987 491 aaPredicted RBP21■□□□□ 0.95
PTCD3-204ENST00000418628 ZNF174Q15697 407 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 POTEBQ6S5H4 581 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 BBXQ8WY36 941 aaPredicted RBP21■□□□□ 0.95
PTCD3-204ENST00000418628 ATP6V0A1Q93050 837 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 PPP1R12CQ9BZL4 782 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 FOXD4L1Q9NU39 408 aa21■□□□□ 0.95
PTCD3-204ENST00000418628 HBP1O60381 514 aa20.99■□□□□ 0.95
PTCD3-204ENST00000418628 OR52Z1P0C646 297 aa20.99■□□□□ 0.95
PTCD3-204ENST00000418628 GNAT1P11488 350 aa20.99■□□□□ 0.95
PTCD3-204ENST00000418628 ATP2B1P20020 1258 aa20.99■□□□□ 0.95
PTCD3-204ENST00000418628 RESTQ13127 1097 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms