RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ACAD9Q9H845 621 aa14.83□□□□□ -0.04
HLA-DMB-258ENST00000418107 A1CFQ9NQ94 594 aaKnown RBP14.83□□□□□ -0.04
HLA-DMB-258ENST00000418107 MSRAQ9UJ68 235 aa14.83□□□□□ -0.04
HLA-DMB-258ENST00000418107 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
HLA-DMB-258ENST00000418107 FAM237AA0A1B0GTK4 181 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 POLR2DO15514 142 aaKnown RBP14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 TDP2O95551 362 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 FGBP02675 491 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 PRPHP41219 470 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 USP11P51784 963 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 OTOP2Q7RTS6 562 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 TLK2Q86UE8 772 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 SLC43A3Q8NBI5 491 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 EPSTI1Q96J88 318 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 ASB2Q96Q27 587 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 RNF146Q9NTX7 359 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 DDX25Q9UHL0 483 aaKnown RBP14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 GNEQ9Y223 722 aaKnown RBP14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 YBX2Q9Y2T7 364 aaKnown RBP14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 CHD7Q9P2D1 2997 aa14.82□□□□□ -0.04
HLA-DMB-258ENST00000418107 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 PIK3CDO00329 1044 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 TXKP42681 527 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 MRE11P49959 708 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 CCL23P55773 120 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 ARHGAP4P98171 946 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 FSCN1Q16658 493 aaKnown RBP14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 PPP4R3AQ6IN85 833 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 TBC1D5Q92609 795 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 TRERF1Q96PN7 1200 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 PYM1Q9BRP8 204 aaKnown RBP14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 MTIF3Q9H2K0 278 aaKnown RBP14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 GRPEL1Q9HAV7 217 aa14.81□□□□□ -0.04
HLA-DMB-258ENST00000418107 ZNF536O15090 1300 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 GRIN2DO15399 1336 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 ASB14A6NK59 587 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 OPLAHO14841 1288 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 DYNC1LI2O43237 492 aaPredicted RBP14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 CABYRO75952 493 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 SMPD1P17405 629 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 UBA7P41226 1012 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 PSMC6P62333 389 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 MRPS5P82675 430 aaKnown RBP14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 TYRO3Q06418 890 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 IL17AQ16552 155 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 KANK3Q6NY19 840 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 KRBA2Q6ZNG9 492 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 USP49Q70CQ1 688 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 CEP57L1Q8IYX8 460 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 DHX58Q96C10 678 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 RAB34Q9BZG1 259 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 AP5M1Q9H0R1 490 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 TRPV6Q9H1D0 765 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 WNT8AQ9H1J5 351 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 SLC28A3Q9HAS3 691 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 PDGFCQ9NRA1 345 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 SERTAD1Q9UHV2 236 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 RAPGEFL1Q9UHV5 662 aa14.8□□□□□ -0.04
HLA-DMB-258ENST00000418107 LRRC37A2A6NM11 1700 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 SLC37A4O43826 429 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 B4GALT4O60513 344 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 SREBF1P36956 1147 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 TECP42680 631 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 RABGGTBP53611 331 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 LONRF3Q496Y0 759 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 TMEM63BQ5T3F8 832 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 EEPD1Q7L9B9 569 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 FBXO16Q8IX29 292 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 AK8Q96MA6 479 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 UHRF1Q96T88 793 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 NOC4LQ9BVI4 516 aaKnown RBP14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 CCDC39Q9UFE4 941 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 USP25Q9UHP3 1055 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 NCOR1O75376 2440 aa14.79□□□□□ -0.04
HLA-DMB-258ENST00000418107 NFIBO00712 420 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 ZEB2O60315 1214 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 MYOGP15173 224 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 TKFCQ3LXA3 575 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 PRR16Q569H4 304 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 MUM1L1Q5H9M0 696 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 TAPT1Q6NXT6 567 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 MOXD1Q6UVY6 613 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 NSMFQ6X4W1 530 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 IQUBQ8NA54 791 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 RBSNQ9H1K0 784 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 GBF1Q92538 1859 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 XIRP2A4UGR9 3374 aa14.78□□□□□ -0.04
HLA-DMB-258ENST00000418107 CYP3A7-CYP3A51PA0A087WV96 503 aa14.77□□□□□ -0.04
HLA-DMB-258ENST00000418107 CYP3A7P24462 503 aa14.77□□□□□ -0.04
HLA-DMB-258ENST00000418107 STX1AQ16623 288 aa14.77□□□□□ -0.04
HLA-DMB-258ENST00000418107 RRAGBQ5VZM2 374 aa14.77□□□□□ -0.04
HLA-DMB-258ENST00000418107 PPP2R2DQ66LE6 453 aa14.77□□□□□ -0.04
HLA-DMB-258ENST00000418107 MICALL1Q8N3F8 863 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms