RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 TPTE2Q6XPS3 522 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 RNF10Q8N5U6 811 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 CELF4Q9BZC1 486 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 ECT2Q9H8V3 914 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 ARHGEF10LQ9HCE6 1279 aa16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 DDX60Q8IY21 1712 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-204ENST00000416649 MTMR3Q13615 1198 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 FIGNQ5HY92 759 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKRD20A2Q5SQ80 823 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKRD20A1Q5TYW2 823 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKRD20A3Q5VUR7 823 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 TXNRD3Q86VQ6 643 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 PRMT1Q99873 361 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 CORO1CQ9ULV4 474 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 GRID2IPA4D2P6 1211 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 PJA2O43164 708 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 PAEPP09466 180 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 LINGO3P0C6S8 592 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 NEFHP12036 1026 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 CTCFP49711 727 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 NPY5RQ15761 445 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 TSC22D3Q99576 134 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZCWPW1Q9H0M4 648 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 SIK3Q9Y2K2 1263 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 MYH7BA7E2Y1 1941 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 CFAP73A6NFT4 308 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 KRIT1O00522 736 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 PRPF3O43395 683 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 SHBGP04278 402 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 PDHA1P08559 390 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 UQCRFS1P1P0C7P4 283 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 HNRNPH3P31942 346 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 NFIXQ14938 502 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLC9C1Q4G0N8 1177 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 ADGRA1Q86SQ6 560 aa16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 INTS9Q9NV88 658 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-204ENST00000416649 TCRBV5S4A2TA0A5A2 114 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 TTI1O43156 1089 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 GNAT1P11488 350 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ARID4AP29374 1257 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 RPS6KA3P51812 740 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 RIPK1Q13546 671 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 MGARPQ8TDB4 240 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ANKRD33BA6NCL7 494 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 LCA5LO95447 670 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 KRT16P08779 473 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ITGA4P13612 1032 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 CYP7A1P22680 504 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ABL2P42684 1182 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 RAB27AP51159 221 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 RAPGEF1Q13905 1077 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 TMC3Q7Z5M5 1100 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 CNOT10Q9H9A5 744 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZFATQ9P243 1243 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 TRIM33Q9UPN9 1127 aa16.04■□□□□ 0.16
NCKIPSD-204ENST00000416649 GSTA1P08263 222 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 KIF5BP33176 963 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLCO1A2P46721 670 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZNF268Q14587 947 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ALX1Q15699 326 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ADAT2Q7Z6V5 191 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZSCAN29Q8IWY8 852 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 F8VZ95 297 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 CLSTN1O94985 981 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 CCND1P24385 295 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 MXRA7P84157 204 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 BLMHQ13867 455 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 LRRC15Q8TF66 581 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 DYDC1Q8WWB3 177 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 BAP1Q92560 729 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ESR2Q92731 530 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 ZNF317Q96PQ6 595 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 TMEM60Q9H2L4 133 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 PAPOLBQ9NRJ5 636 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 RTL9Q8NET4 1388 aa16.03■□□□□ 0.16
NCKIPSD-204ENST00000416649 PLCG1P19174 1290 aa16.02■□□□□ 0.16
NCKIPSD-204ENST00000416649 ATP4AP20648 1035 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms