RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 CHMP6Q96FZ7 201 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 RWDD2AQ9UIY3 292 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 IRAK4Q9NWZ3 460 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 STK17AQ9UEE5 414 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SUDS3Q9H7L9 328 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 A0A1W2PQ27 194 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 A0A1W2PQ64 194 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 A0A1W2PQD8 194 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SLC7A5Q01650 507 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 RNF139Q8WU17 664 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 TBK1Q9UHD2 729 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 ZBTB5O15062 677 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 TROVE2P10155 538 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SIX6OS1Q8N1H7 587 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SLC12A6Q9UHW9 1150 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 OVOS2A0A0J9YW53 1432 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 MCF2LO15068 1137 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 INHBAP08476 426 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 RESTQ13127 1097 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 TMTC4Q5T4D3 741 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 OVOS2Q6IE36 1432 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 PTCH1Q13635 1447 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 STXBP2Q15833 593 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 MAP7D3Q8IWC1 876 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 BASP1P80723 227 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 TOB2Q14106 344 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 UTYO14607 1347 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 CRB1P82279 1406 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 GNGT1P63211 74 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 ELF1P32519 619 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 FOXO4P98177 505 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 PRDM5Q9NQX1 630 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 F5H423 210 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 MXI1P50539 228 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 TCP11X2Q5H9J9 407 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 CROCCP2Q86T23 111 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 RSRC1Q96IZ7 334 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 EPB41L5Q9HCM4 733 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 GARSP41250 739 aaKnown RBP11.49□□□□□ -0.57
COL12A1-203ENST00000416123 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
COL12A1-203ENST00000416123 DENND3A2RUS2 1198 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 CPP00450 1065 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 GANCQ8TET4 914 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 CPSF1Q10570 1443 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 PFDN6O15212 129 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 NFIXQ14938 502 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 SWSAP1Q6NVH7 229 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 TMTC3Q6ZXV5 915 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 DCP1AQ9NPI6 582 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 ATP8A1Q9Y2Q0 1164 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 PPRC1Q5VV67 1664 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 PRPSAP2O60256 369 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 BAG2O95816 211 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 MRPS25P82663 173 aaKnown RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 IFNAR2P48551 515 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms