RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ADAM15Q13444 863 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.43
DDX56-202ENST00000415758 GRIK4Q16099 956 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 NAALADL2Q58DX5 795 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 FBXL18Q96ME1 805 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 SMARCAD1Q9H4L7 1026 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 PLAGL2Q9UPG8 496 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
DDX56-202ENST00000415758 MAFGO15525 162 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 TBX10O75333 385 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
DDX56-202ENST00000415758 ITGB5P18084 799 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 MRE11P49959 708 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 RTN4RL1Q86UN2 441 aaPredicted RBP17.7■□□□□ 0.42
DDX56-202ENST00000415758 PIBF1Q8WXW3 757 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 LZTS2Q9BRK4 669 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 FTHL17Q9BXU8 183 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 AGO3Q9H9G7 860 aaKnown RBP17.7■□□□□ 0.42
DDX56-202ENST00000415758 CDY2AQ9Y6F7 541 aa17.7■□□□□ 0.42
DDX56-202ENST00000415758 RRN3P2A6NIE6 340 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 DDAH1O94760 285 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 EYA4O95677 639 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 CHMLP26374 656 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 KIF5BP33176 963 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX56-202ENST00000415758 TTC22Q5TAA0 569 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 MB21D2Q8IYB1 491 aaPredicted RBP17.69■□□□□ 0.42
DDX56-202ENST00000415758 CMTR2Q8IYT2 770 aaKnown RBP17.69■□□□□ 0.42
DDX56-202ENST00000415758 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
DDX56-202ENST00000415758 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 PSTPIP2Q9H939 334 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
DDX56-202ENST00000415758 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
DDX56-202ENST00000415758 TECTAO75443 2155 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 GNAQP50148 359 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 MRPS6P82932 125 aaKnown RBP17.68■□□□□ 0.42
DDX56-202ENST00000415758 CLUL1Q15846 466 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 IER5Q5VY09 327 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
DDX56-202ENST00000415758 RNF135Q8IUD6 432 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 LINC01599Q8WXQ3 324 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 GLG1Q92896 1179 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 PPP2R3CQ969Q6 453 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 LY9Q9HBG7 655 aa17.68■□□□□ 0.42
DDX56-202ENST00000415758 SEC63Q9UGP8 760 aaKnown RBP17.68■□□□□ 0.42
DDX56-202ENST00000415758 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
DDX56-202ENST00000415758 STXBP3O00186 592 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 LINC01565O15544 149 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 ITGB1P05556 798 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 DNAJB1P25685 340 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 MARK3P27448 753 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 CD52P31358 61 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 MTMR1Q13613 665 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 BMP8AQ7Z5Y6 402 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 TMTC2Q8N394 836 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 SRBD1Q8N5C6 995 aaKnown RBP17.67■□□□□ 0.42
DDX56-202ENST00000415758 EFHBQ8N7U6 833 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 EDAQ92838 391 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
DDX56-202ENST00000415758 IGFLR1Q9H665 355 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 MUTYHQ9UIF7 546 aa17.67■□□□□ 0.42
DDX56-202ENST00000415758 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 SGSM2O43147 1006 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 INSRRP14616 1297 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 PDE4AP27815 886 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 COASYQ13057 564 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 PCYT2Q99447 389 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 CLEC1BQ9P126 229 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 LOXHD1Q8IVV2 1947 aa17.66■□□□□ 0.42
DDX56-202ENST00000415758 STAG3L1P0CL83 205 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 KLHL23Q8NBE8 558 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 SMRP1Q8NCR6 262 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 PADI3Q9ULW8 664 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 TRPV2Q9Y5S1 764 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 IGSF9BQ9UPX0 1349 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 KDM3AQ9Y4C1 1321 aa17.65■□□□□ 0.42
DDX56-202ENST00000415758 LOC730098B7Z3J9 87 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 NDUFV1P49821 464 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 IGBP1P78318 339 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 CBX2Q14781 532 aaPredicted RBP17.64■□□□□ 0.41
DDX56-202ENST00000415758 PLPPR4Q7Z2D5 763 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 ADGRD2Q7Z7M1 963 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 NME8Q8N427 588 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 POF1BQ8WVV4 589 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 ZBTB10Q96DT7 871 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms