RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ABL1P00519 1130 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 ALADP13716 330 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 EXOSC10Q01780 885 aaKnown RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 GUCY1A3Q02108 690 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 CCNI2Q6ZMN8 369 aaPredicted RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 DHX32Q7L7V1 743 aaKnown RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 RALYLQ86SE5 291 aaKnown RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 NAPGQ99747 312 aaPredicted RBP22.28■■□□□ 1.16
AP1S3-205ENST00000415298 DESI2Q9BSY9 194 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 LZTFL1Q9NQ48 299 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 FAM47AQ5JRC9 791 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 ANKRD20A2Q5SQ80 823 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 ANKRD20A1Q5TYW2 823 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 ANKRD20A3Q5VUR7 823 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 ARL8AQ96BM9 186 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 HVCN1Q96D96 273 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 TRIM11Q96F44 468 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 TRAPPC9Q96Q05 1148 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 NDST4Q9H3R1 872 aa22.28■■□□□ 1.16
AP1S3-205ENST00000415298 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
AP1S3-205ENST00000415298 STAT6P42226 847 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 PSMD7P51665 324 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 ANGEL2Q5VTE6 544 aaKnown RBP22.27■■□□□ 1.16
AP1S3-205ENST00000415298 ATL3Q6DD88 541 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 POTECB2RU33 542 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 PFDN1O60925 122 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 DTNBO60941 627 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 DPCR1Q3MIW9 517 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 DLK2Q6UY11 383 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 SMC1BQ8NDV3 1235 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 KIFAP3Q92845 792 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.27■■□□□ 1.16
AP1S3-205ENST00000415298 FAM184BQ9ULE4 1060 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 ITM2BQ9Y287 266 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
AP1S3-205ENST00000415298 LAMB1P07942 1786 aa22.27■■□□□ 1.16
AP1S3-205ENST00000415298 E7EVH7 732 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 RANBP6O60518 1105 aaKnown RBP22.26■■□□□ 1.15
AP1S3-205ENST00000415298 FGRP09769 529 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 TAF11Q15544 211 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 PRAMEF18Q5VWM3 479 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 APBB1IPQ7Z5R6 666 aaPredicted RBP22.26■■□□□ 1.15
AP1S3-205ENST00000415298 FANCLQ9NW38 375 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 CDK8P49336 464 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 OXCT1P55809 520 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 ST3GAL1Q11201 340 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 TOB2Q14106 344 aaPredicted RBP22.26■■□□□ 1.15
AP1S3-205ENST00000415298 ANO7Q6IWH7 933 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 LMNTD2Q8IXW0 634 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 SLC15A3Q8IY34 581 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 FGD4Q96M96 766 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 CIDEBQ9UHD4 219 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 ITGB1BP2Q9UKP3 347 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 CFAP45Q9UL16 551 aa22.26■■□□□ 1.15
AP1S3-205ENST00000415298 POLR2AP24928 1970 aaKnown RBP22.26■■□□□ 1.15
AP1S3-205ENST00000415298 IKBKBO14920 756 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 PRC1O43663 620 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 ENTPD3O75355 529 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 IDO1P14902 403 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 SESTD1Q86VW0 696 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 PPP1R14BQ96C90 147 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 DNAJC18Q9H819 358 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 TMEM232C9JQI7 657 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 EIF3FO00303 357 aaPredicted RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 SERPINC1P01008 464 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 FAM160A1Q05DH4 1040 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 GABPAQ06546 454 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 TBX2Q13207 712 aaPredicted RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 CCDC63Q8NA47 563 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 AENQ8WTP8 325 aaKnown RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 FAM151AQ8WW52 585 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 RNF41Q9H4P4 317 aaPredicted RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 MKNK2Q9HBH9 465 aa22.25■■□□□ 1.15
AP1S3-205ENST00000415298 LUC7LQ9NQ29 371 aaKnown RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 ADARB2Q9NS39 739 aaKnown RBP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.25■■□□□ 1.15
AP1S3-205ENST00000415298 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 NMT2O60551 498 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 FLT3P36888 993 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 MDH1P40925 334 aaKnown RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 TUBP50607 506 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 FOXD4Q12950 439 aaPredicted RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 ZNF268Q14587 947 aaPredicted RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 C16orf86Q6ZW13 317 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 ENGASEQ8NFI3 743 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 CTNNBL1Q8WYA6 563 aaPredicted RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 BHMTQ93088 406 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 CSRNP1Q96S65 589 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 GOLPH3LQ9H4A5 285 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 RHBDL2Q9NX52 303 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 GGA3Q9NZ52 723 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 SERPINB13Q9UIV8 391 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 EVI5O60447 810 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 FUT4P22083 530 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 PDE4BQ07343 736 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 LSM14AQ8ND56 463 aaKnown RBP22.24■■□□□ 1.15
AP1S3-205ENST00000415298 SYT15Q9BQS2 421 aa22.24■■□□□ 1.15
AP1S3-205ENST00000415298 UBAP1Q9NZ09 502 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms