RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 STAG3L1P0CL83 205 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 SNHG28P0DPA3 235 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
CPNE1-208ENST00000414711 MYCLP12524 364 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-208ENST00000414711 NPR3P17342 541 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 GATMP50440 423 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 FBXO47Q5MNV8 452 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 PLPP4Q5VZY2 271 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 CES5AQ6NT32 575 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 PDCD2LQ9BRP1 358 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 USP26Q9BXU7 913 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
CPNE1-208ENST00000414711 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-208ENST00000414711 FGF18O76093 207 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 TGFB3P10600 412 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 SPOUT1Q5T280 376 aaKnown RBP18.38■□□□□ 0.53
CPNE1-208ENST00000414711 ZDHHC14Q8IZN3 488 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 AAASQ9NRG9 546 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 LIMD1Q9UGP4 676 aa18.38■□□□□ 0.53
CPNE1-208ENST00000414711 SCG2P13521 617 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 GPATCH4Q5T3I0 446 aaKnown RBP18.37■□□□□ 0.53
CPNE1-208ENST00000414711 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 THNSL1Q8IYQ7 743 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 DCLK2Q8N568 766 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 GPKOWQ92917 476 aaPredicted RBP eCLIP18.37■□□□□ 0.53
CPNE1-208ENST00000414711 FTHL17Q9BXU8 183 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 ADAM7Q9H2U9 754 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 AGO3Q9H9G7 860 aaKnown RBP18.37■□□□□ 0.53
CPNE1-208ENST00000414711 TOMM22Q9NS69 142 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
CPNE1-208ENST00000414711 MRPL11Q9Y3B7 192 aaKnown RBP18.37■□□□□ 0.53
CPNE1-208ENST00000414711 FOXP2O15409 715 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 CFBP00751 764 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 CD52P31358 61 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 ITIH3Q06033 890 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
CPNE1-208ENST00000414711 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
CPNE1-208ENST00000414711 RTN4RL1Q86UN2 441 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-208ENST00000414711 IL31RAQ8NI17 732 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 NRCAMQ92823 1304 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 CASP10Q92851 521 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 ANAPC4Q9UJX5 808 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
CPNE1-208ENST00000414711 PKD1L2Q7Z442 2459 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 HSD17B4P51659 736 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
CPNE1-208ENST00000414711 SIX5Q8N196 739 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 LRFN2Q9ULH4 789 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 GPR179Q6PRD1 2367 aa18.35■□□□□ 0.53
CPNE1-208ENST00000414711 HIDE1A8MVS5 230 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 FGRP09769 529 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 MTHFRP42898 656 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 COL9A2Q14055 689 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-208ENST00000414711 PGM5Q15124 567 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 TSHZ3Q63HK5 1081 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 METTL7BQ6UX53 244 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 VSIG10LQ86VR7 867 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 COLGALT1Q8NBJ5 622 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-208ENST00000414711 GPR20Q99678 358 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 FBXL21Q9UKT6 434 aa18.34■□□□□ 0.53
CPNE1-208ENST00000414711 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-208ENST00000414711 WEE2P0C1S8 567 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-208ENST00000414711 SDHBP21912 280 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 UTP14CQ5TAP6 766 aaKnown RBP18.33■□□□□ 0.52
CPNE1-208ENST00000414711 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 PLCD3Q8N3E9 789 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 DNAJB3Q8WWF6 145 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-208ENST00000414711 TUBE1Q9UJT0 475 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 LZTS1Q9Y250 596 aa18.33■□□□□ 0.52
CPNE1-208ENST00000414711 OPLAHO14841 1288 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 CCND2P30279 289 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 MRPS6P82932 125 aaKnown RBP18.32■□□□□ 0.52
CPNE1-208ENST00000414711 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 HCSTQ9UBK5 93 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 RALYQ9UKM9 306 aaKnown RBP18.32■□□□□ 0.52
CPNE1-208ENST00000414711 DUSP12Q9UNI6 340 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 USTQ9Y2C2 406 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 HCFC2Q9Y5Z7 792 aa18.32■□□□□ 0.52
CPNE1-208ENST00000414711 TBKBP1A7MCY6 615 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 ATXN1P54253 815 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms