RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CACNB2Q08289 660 aaPredicted RBP11.15□□□□□ -0.62
DDB1-202ENST00000414411 SPIRE1Q08AE8 756 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 TRIM32Q13049 653 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 TMEM63BQ5T3F8 832 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 MFSD14CQ5VZR4 134 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 SLFN12Q8IYM2 578 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 KRI1Q8N9T8 703 aaKnown RBP11.15□□□□□ -0.62
DDB1-202ENST00000414411 CLIC6Q96NY7 704 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 UIMC1Q96RL1 719 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 TBC1D22BQ9NU19 505 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 FBXO2Q9UK22 296 aaPredicted RBP11.15□□□□□ -0.62
DDB1-202ENST00000414411 SRPRBQ9Y5M8 271 aaKnown RBP11.15□□□□□ -0.62
DDB1-202ENST00000414411 PTCH2Q9Y6C5 1203 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 BIN1O00499 593 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 NFASCO94856 1347 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 HMGCRP04035 888 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 GRK4P32298 578 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 TXKP42681 527 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■□□ 16.2
DDB1-202ENST00000414411 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 CACTINQ8WUQ7 758 aaKnown RBP11.15□□□□□ -0.62
DDB1-202ENST00000414411 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 VAV3Q9UKW4 847 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
DDB1-202ENST00000414411 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 DYNC1I1O14576 645 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 ADCY6O43306 1168 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 TXNP10599 105 aaKnown RBP11.14□□□□□ -0.63
DDB1-202ENST00000414411 UBA1P22314 1058 aaKnown RBP11.14□□□□□ -0.63
DDB1-202ENST00000414411 ADCYAP1R1P41586 468 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 GRIN1Q05586 938 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 PDIA5Q14554 519 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 DUSP28Q4G0W2 176 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 DTHD1Q6ZMT9 781 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 CTU1Q7Z7A3 348 aaKnown RBP11.14□□□□□ -0.63
DDB1-202ENST00000414411 IGSF22Q8N9C0 903 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 MYRIPQ8NFW9 859 aa11.14□□□□□ -0.63
DDB1-202ENST00000414411 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
DDB1-202ENST00000414411 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 SMPD1P17405 629 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 TECP42680 631 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 PPP2R5CQ13362 524 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 NEDD9Q14511 834 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 NCAPHQ15003 741 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 LRCH2Q5VUJ6 765 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 KCNH3Q9ULD8 1083 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 DNAH12Q6ZR08 3092 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 VWA3AA6NCI4 1184 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 IKBKBO14920 756 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 RRP9O43818 475 aaKnown RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 MARCH6O60337 910 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 GAS7O60861 476 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 FARP2O94887 1054 aaPredicted RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 CCNE2O96020 404 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 METTL7BQ6UX53 244 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 KRBA2Q6ZNG9 492 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 CYFIP1Q7L576 1253 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 ELOA2Q8IYF1 753 aaPredicted RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 COPS5Q92905 334 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
DDB1-202ENST00000414411 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 PRDM10Q9NQV6 1147 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
DDB1-202ENST00000414411 WDR81Q562E7 1941 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 SMTNL1A8MU46 457 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 EML1O00423 815 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDB1-202ENST00000414411 SEPT4O43236 478 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 GGPS1O95749 300 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 INHAP05111 366 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 AKR1A1P14550 325 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
DDB1-202ENST00000414411 TPM4P67936 248 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 ARHGAP1Q07960 439 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 PNOCQ13519 176 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
DDB1-202ENST00000414411 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 GJC2Q5T442 439 aaPredicted RBP11.12□□□□□ -0.63
DDB1-202ENST00000414411 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 CSRNP2Q9H175 543 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 UNC45AQ9H3U1 944 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 JPH1Q9HDC5 661 aaPredicted RBP11.12□□□□□ -0.63
DDB1-202ENST00000414411 Q9Y3F1 56 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
DDB1-202ENST00000414411 POTEMA6NI47 508 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 ATG7O95352 703 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 CCND3P30281 292 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms