RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 SYNPO2Q9UMS6 1093 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 PCDHA5Q9Y5H7 936 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 PARP14Q460N5 1801 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 VWA3AA6NCI4 1184 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 SMC2O95347 1197 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 ATP2A2P16615 1042 aaKnown RBP19.24■□□□□ 0.67
PTPRC-206ENST00000413409 MCM7P33993 719 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 GJA9P57773 515 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 NONOQ15233 471 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTPRC-206ENST00000413409 CT47A1Q5JQC4 288 aaPredicted RBP19.24■□□□□ 0.67
PTPRC-206ENST00000413409 GNASQ5JWF2 1037 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 TMEM179Q6ZVK1 233 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 USP49Q70CQ1 688 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 HOMER1Q86YM7 354 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 RASGRP4Q8TDF6 673 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 MAN1B1Q9UKM7 699 aa19.24■□□□□ 0.67
PTPRC-206ENST00000413409 COL11A1P12107 1806 aaPredicted RBP19.23■□□□□ 0.67
PTPRC-206ENST00000413409 FRMPD2Q68DX3 1309 aaPredicted RBP19.23■□□□□ 0.67
PTPRC-206ENST00000413409 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 TXLNAP40222 546 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 STAT3P40763 770 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 MYL5Q02045 173 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 MORC3Q14149 939 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 NCAPHQ15003 741 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 MAMDC4Q6UXC1 1216 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 MLKLQ8NB16 471 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 EPSTI1Q96J88 318 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 NOC4LQ9BVI4 516 aaKnown RBP19.23■□□□□ 0.67
PTPRC-206ENST00000413409 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
PTPRC-206ENST00000413409 ZNF214Q9UL59 606 aaPredicted RBP19.23■□□□□ 0.67
PTPRC-206ENST00000413409 A0A087X0B3 334 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 PNMA6FA0A0J9YX94 578 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 TTLL4Q14679 1199 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 REXO1Q8N1G1 1221 aaKnown RBP19.22■□□□□ 0.67
PTPRC-206ENST00000413409 MSL3Q8N5Y2 521 aaKnown RBP19.22■□□□□ 0.67
PTPRC-206ENST00000413409 IQUBQ8NA54 791 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 REPS2Q8NFH8 660 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 DHX58Q96C10 678 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 FBXL18Q96ME1 805 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 TMX2Q9Y320 296 aa19.22■□□□□ 0.67
PTPRC-206ENST00000413409 GRIN2DO15399 1336 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 ZBBXA8MT70 800 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 PRR29P0C7W0 189 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 ADCY7P51828 1080 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 BEX3Q00994 111 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 ACVR2BQ13705 512 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 E2F4Q16254 413 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 INF2Q27J81 1249 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 CCDC96Q2M329 555 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 SPRED2Q7Z698 418 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 PDILTQ8N807 584 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 SPC24Q8NBT2 197 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 SCLYQ96I15 445 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 UIMC1Q96RL1 719 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 TRPV6Q9H1D0 765 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 VCPKMTQ9H867 229 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 JMJD4Q9H9V9 463 aa19.21■□□□□ 0.67
PTPRC-206ENST00000413409 DNAJC25-GNG10A0A024R161 153 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 VWA5AO00534 786 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 LPXNO60711 386 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 TAP1Q03518 808 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 ICA1Q05084 483 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 GRB10Q13322 594 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 IL17AQ16552 155 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.2■□□□□ 0.66
PTPRC-206ENST00000413409 NEK8Q86SG6 692 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 GMCL1P1Q8NEA9 526 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 ARNTL2Q8WYA1 636 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 PAGE5Q96GU1 130 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 GLT8D2Q9H1C3 349 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 TTC12Q9H892 705 aaPredicted RBP19.2■□□□□ 0.66
PTPRC-206ENST00000413409 GPCPD1Q9NPB8 672 aa19.2■□□□□ 0.66
PTPRC-206ENST00000413409 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
PTPRC-206ENST00000413409 NEMFO60524 1076 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 NKX3-2P78367 333 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 DHX8Q14562 1220 aaKnown RBP19.19■□□□□ 0.66
PTPRC-206ENST00000413409 PDXDC2PQ6P474 469 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 CXCL17Q6UXB2 119 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 DTHD1Q6ZMT9 781 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 DRC7Q8IY82 874 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 FGD4Q96M96 766 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 AK8Q96MA6 479 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 AGBL1Q96MI9 1066 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 KCNF1Q9H3M0 494 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 RIC8AQ9NPQ8 531 aa19.19■□□□□ 0.66
PTPRC-206ENST00000413409 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
PTPRC-206ENST00000413409 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
PTPRC-206ENST00000413409 USP34Q70CQ2 3546 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 ZBTB5O15062 677 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 OFD1O75665 1012 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 OR52Z1P0C646 297 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
PTPRC-206ENST00000413409 BMP6P22004 513 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms