RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SP2Q02086 613 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 IQCB1Q15051 598 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 UGCGQ16739 394 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 DEFB115Q30KQ5 88 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 KMT5BQ4FZB7 885 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 MORN1Q5T089 497 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 MAMDC4Q6UXC1 1216 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 UNC13DQ70J99 1090 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 GPBP1Q86WP2 473 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 TPH2Q8IWU9 490 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 DHX40Q8IX18 779 aaKnown RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 AOPEPQ8N6M6 819 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 SYT2Q8N9I0 419 aaPredicted RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 MLKLQ8NB16 471 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 DDX12PQ92771 950 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 MAML3Q96JK9 1138 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 BHMT2Q9H2M3 363 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 BCAS3Q9H6U6 928 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ZSWIM4Q9H7M6 989 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 VTA1Q9NP79 307 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 EXOC1Q9NV70 894 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 DACH1Q9UI36 760 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 DNM3Q9UQ16 869 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 DIS3Q9Y2L1 958 aaKnown RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 PCDHA10Q9Y5I2 948 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ARID2Q68CP9 1835 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 IGSF9BQ9UPX0 1349 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 MCM3APO60318 1980 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 MGAMO43451 1857 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 PVALEFA0A1B0GWK0 134 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 FRMD3A2A2Y4 597 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SORBS3O60504 671 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 GGPS1O95749 300 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 PSAPP07602 524 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SUPT20HL2P0C7V6 817 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 TGFB3P10600 412 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 DEKP35659 375 aaKnown RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 QARSP47897 775 aaKnown RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 PSMC5P62195 406 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SP4Q02446 784 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 EHHADHQ08426 723 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 NEDD9Q14511 834 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 UVSSAQ2YD98 709 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 ARSHQ5FYA8 562 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 ZNF658Q5TYW1 1059 aaPredicted RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 MIS18BP1Q6P0N0 1132 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 METTL7BQ6UX53 244 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 ABHD15Q6UXT9 468 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 CYFIP1Q7L576 1253 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 DYMQ7RTS9 669 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 DPP9Q86TI2 863 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 CCDC60Q8IWA6 550 aaPredicted RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 NPLOC4Q8TAT6 608 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 PIGOQ8TEQ8 1089 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SCFD2Q8WU76 684 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SOCS4Q8WXH5 440 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 CCDC47Q96A33 483 aaKnown RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 DNAJC19Q96DA6 116 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 APBA2Q99767 749 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 KATNBL1Q9H079 304 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 SLC5A4Q9NY91 659 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 DDX41Q9UJV9 622 aaKnown RBP7.41□□□□□ -1.22
VPS41-204ENST00000413141 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 TELO2Q9Y4R8 837 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SYNGAP1Q96PV0 1343 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
VPS41-204ENST00000413141 IGKV6D-21A0A0A0MT36 114 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 NPHP3-ACAD11A0A0J9YXS1 232 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 BECN2A8MW95 431 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 PPP1R3GB7ZBB8 358 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 GOLGA6L19H0YKK7 550 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 TNPO2O14787 897 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 IKBKBO14920 756 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 ZBTB39O15060 712 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 ECM2O94769 699 aaPredicted RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 ATG7O95352 703 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 SNAI1O95863 264 aaPredicted RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 KRT18P05783 430 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 HOXC6P09630 235 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 PRKAR2AP13861 404 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 IDEP14735 1019 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 CD44P16070 742 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 CTGFP29279 349 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 YWHABP31946 246 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 RGS2P41220 211 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 RARRES1P49788 294 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 MYL5Q02045 173 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 PRKCEQ02156 737 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 COASYQ13057 564 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms