RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 CAMK1Q14012 370 aa15.76■□□□□ 0.11
RAB5A-202ENST00000412966 COL9A3Q14050 684 aaPredicted RBP15.76■□□□□ 0.11
RAB5A-202ENST00000412966 SMAD2Q15796 467 aaKnown RBP15.76■□□□□ 0.11
RAB5A-202ENST00000412966 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
RAB5A-202ENST00000412966 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
RAB5A-202ENST00000412966 RUFY2Q8WXA3 655 aa15.76■□□□□ 0.11
RAB5A-202ENST00000412966 SEPT1Q8WYJ6 367 aa15.76■□□□□ 0.11
RAB5A-202ENST00000412966 ZBTB10Q96DT7 871 aa15.76■□□□□ 0.11
RAB5A-202ENST00000412966 AGO3Q9H9G7 860 aaKnown RBP15.76■□□□□ 0.11
RAB5A-202ENST00000412966 LINC01565O15544 149 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 SGSM2O43147 1006 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 TBX10O75333 385 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 DGKIO75912 1065 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 DDAH1O94760 285 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 CSPG5O95196 566 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 MMP1P03956 469 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 BTG3Q14201 252 aaPredicted RBP15.75■□□□□ 0.11
RAB5A-202ENST00000412966 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 TSHZ1Q6ZSZ6 1077 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 RTN4RL1Q86UN2 441 aaPredicted RBP15.75■□□□□ 0.11
RAB5A-202ENST00000412966 CRIPAKQ8N1N5 446 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
RAB5A-202ENST00000412966 PCYT2Q99447 389 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 ALG13Q9NP73 1137 aaKnown RBP15.75■□□□□ 0.11
RAB5A-202ENST00000412966 ERAP1Q9NZ08 941 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 UBIAD1Q9Y5Z9 338 aa15.75■□□□□ 0.11
RAB5A-202ENST00000412966 PLXNA4Q9HCM2 1894 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 DNAJB1P25685 340 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 CD52P31358 61 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 KIF5BP33176 963 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 MRPS6P82932 125 aaKnown RBP15.74■□□□□ 0.11
RAB5A-202ENST00000412966 UBE2SQ16763 222 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 CMTR1Q8N1G2 835 aaKnown RBP15.74■□□□□ 0.11
RAB5A-202ENST00000412966 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 CDHR1Q96JP9 859 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 PLVAPQ9BX97 442 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 IGFLR1Q9H665 355 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
RAB5A-202ENST00000412966 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
RAB5A-202ENST00000412966 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
RAB5A-202ENST00000412966 INSRRP14616 1297 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 IGBP1P78318 339 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 ADAM15Q13444 863 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 SMAD4Q13485 552 aaKnown RBP15.73■□□□□ 0.11
RAB5A-202ENST00000412966 MTMR1Q13613 665 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 HFE2Q6ZVN8 426 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 GLG1Q92896 1179 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 MSLNLQ96KJ4 702 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 FBXL18Q96ME1 805 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 SMARCAD1Q9H4L7 1026 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 PSTPIP2Q9H939 334 aa15.73■□□□□ 0.11
RAB5A-202ENST00000412966 RBM8AQ9Y5S9 174 aaKnown RBP15.73■□□□□ 0.11
RAB5A-202ENST00000412966 FNDC1Q4ZHG4 1894 aaPredicted RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 hCG_1642624A0A1W2PR95 340 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 SH2B2O14492 632 aaPredicted RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 ITGB1P05556 798 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 RXRAP19793 462 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 GNAQP50148 359 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 NHLH1Q02575 133 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 HERC4Q5GLZ8 1057 aaPredicted RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 ADGRD2Q7Z7M1 963 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 P2RX5Q93086 422 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 FAM49AQ9H0Q0 323 aaPredicted RBP15.72■□□□□ 0.11
RAB5A-202ENST00000412966 JADE2Q9NQC1 790 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 MUTYHQ9UIF7 546 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 CD207Q9UJ71 328 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 SQORQ9Y6N5 450 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 EVPLQ92817 2033 aa15.72■□□□□ 0.11
RAB5A-202ENST00000412966 RRN3P2A6NIE6 340 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 PRC1O43663 620 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 MRE11P49959 708 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 CASC1Q6TDU7 716 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 RNF135Q8IUD6 432 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 NPAS4Q8IUM7 802 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 TRAPPC12Q8WVT3 735 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 POP1Q99575 1024 aaKnown RBP15.71■□□□□ 0.11
RAB5A-202ENST00000412966 MTA3Q9BTC8 594 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 KCNH6Q9H252 994 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 PADI3Q9ULW8 664 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 TRPV2Q9Y5S1 764 aa15.71■□□□□ 0.11
RAB5A-202ENST00000412966 STXBP3O00186 592 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 MAFGO15525 162 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 EYA4O95677 639 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 GATMP50440 423 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 TMEM62Q0P6H9 643 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 PLCB4Q15147 1175 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 PAN2Q504Q3 1202 aaKnown RBP15.7■□□□□ 0.1
RAB5A-202ENST00000412966 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 FTHL17Q9BXU8 183 aa15.7■□□□□ 0.1
RAB5A-202ENST00000412966 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms