RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 THG1LQ9NWX6 298 aaKnown RBP5.72□□□□□ -1.49
BRCA1-204ENST00000412061 TRHDEQ9UKU6 1024 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 DSEQ9UL01 958 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 H7C1D1 291 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 MAFGO15525 162 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 FGAP02671 866 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 GLI4P10075 376 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 ZSCAN20P17040 1043 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 TRHRP34981 398 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 ID4P47928 161 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 KPNA1P52294 538 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 ZNF792Q3KQV3 632 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 TIGD5Q53EQ6 642 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 STEAP3Q658P3 488 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 CYP4F22Q6NT55 531 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 PTRH1Q86Y79 214 aaKnown RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 NLGN4XQ8N0W4 816 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 NETO2Q8NC67 525 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 UHMK1Q8TAS1 419 aaKnown RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 JPH3Q8WXH2 748 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 PPM1EQ8WY54 764 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 SEC14L1Q92503 715 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 AP5M1Q9H0R1 490 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 PPCSQ9HAB8 311 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.5
BRCA1-204ENST00000412061 SRPK3Q9UPE1 567 aa5.71□□□□□ -1.5
BRCA1-204ENST00000412061 TCRBV5S4A2TA0A5A2 114 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 HGSO14964 777 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-204ENST00000412061 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 HIP1RO75146 1068 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 ADAMTS4O75173 837 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 KRT37O76014 449 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 EFEMP2O95967 443 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
BRCA1-204ENST00000412061 IRF9Q00978 393 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 MORC3Q14149 939 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 ZNF174Q15697 407 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 FIGNQ5HY92 759 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 EFHBQ8N7U6 833 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 CNTD1Q8N815 330 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 ABHD4Q8TB40 342 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 PHOSPHO1Q8TCT1 267 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 E2F7Q96AV8 911 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 SHISA4Q96DD7 197 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 PUS7LQ9H0K6 701 aaKnown RBP5.7□□□□□ -1.5
BRCA1-204ENST00000412061 SMOC1Q9H4F8 434 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 TNFRSF12AQ9NP84 129 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 EMC7Q9NPA0 242 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 OXSMQ9NWU1 459 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 TAGLN3Q9UI15 199 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 NUDT5Q9UKK9 219 aa5.7□□□□□ -1.5
BRCA1-204ENST00000412061 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 MAN2B1O00754 1011 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 KCNK3O14649 394 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 GABRDO14764 452 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 NPHP1O15259 732 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 CLASP2O75122 1294 aaKnown RBP5.69□□□□□ -1.5
BRCA1-204ENST00000412061 ULK1O75385 1050 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 TADA3O75528 432 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 RFPL1O75677 317 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 DBHP09172 617 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 NBPF7P0C2Y1 421 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-204ENST00000412061 ZBTB48P10074 688 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-204ENST00000412061 YBX3P16989 372 aaKnown RBP eCLIP5.69□□□□□ -1.5
BRCA1-204ENST00000412061 CD53P19397 219 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 AFMP43652 599 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 LMOD3Q0VAK6 560 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 WDR78Q5VTH9 848 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 CREB3L3Q68CJ9 461 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 IQSEC1Q6DN90 963 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 IL31Q6EBC2 164 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 NOSTRINQ8IVI9 506 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 SH3RF2Q8TEC5 729 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 COG1Q8WTW3 980 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 FMNL2Q96PY5 1086 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 RHOBTB2Q9BYZ6 727 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 SPTLC3Q9NUV7 552 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 OBP2AQ9NY56 170 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 IP6K2Q9UHH9 426 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 ZNF652Q9Y2D9 606 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 DAAM1Q9Y4D1 1078 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 TNKSO95271 1327 aa5.69□□□□□ -1.5
BRCA1-204ENST00000412061 A0A0U1RQG5 324 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-204ENST00000412061 PAX4O43316 350 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 ABLIM3O94929 683 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 CYBBP04839 570 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 NEK3P51956 506 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 PURAQ00577 322 aaKnown RBP5.68□□□□□ -1.5
BRCA1-204ENST00000412061 POU5F1BQ06416 359 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 FAPQ12884 760 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 RAPGEF1Q13905 1077 aa5.68□□□□□ -1.5
BRCA1-204ENST00000412061 GRAMD1BQ3KR37 738 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms