RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ZNF227Q86WZ6 799 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 GPRASP2Q96D09 838 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 SCYL1Q96KG9 808 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 PARPBPQ9NWS1 579 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZNF839A8K0R7 811 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 IL18BPO95998 194 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 LTFP02788 710 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 MSX2P35548 267 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 RANGAP1P46060 587 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 NASPP49321 788 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 FOXL1Q12952 345 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 DPP8Q6V1X1 898 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 TMEM145Q8NBT3 493 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 SLC2A4RGQ9NR83 387 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 PUF60Q9UHX1 559 aaKnown RBP4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 GIT1Q9Y2X7 761 aa4.05□□□□□ -1.76
HMGB3P2-201ENST00000411913 ARHGAP6O43182 974 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 COL6A2P12110 1019 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 IL12RB1P42701 662 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 GFRA1P56159 465 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 SPIRE1Q08AE8 756 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 FSTL1Q12841 308 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 TOP3AQ13472 1001 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 DENND5AQ6IQ26 1287 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 OTOP3Q7RTS5 596 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 ULK2Q8IYT8 1036 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 THEMISQ8N1K5 641 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 FAM169BQ8N8A8 192 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZNF703Q9H7S9 590 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 PLA2G3Q9NZ20 509 aa4.04□□□□□ -1.76
HMGB3P2-201ENST00000411913 TMEM191CA6NGB0 347 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 GNAT1P11488 350 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZC3H6P61129 1189 aaKnown RBP4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 DUSP8Q13202 625 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 WDR72Q3MJ13 1102 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 PCSK4Q6UW60 755 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 RASGRP4Q8TDF6 673 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 ANAPC16Q96DE5 110 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 KCNJ15Q99712 375 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 CDIP1Q9H305 208 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 SLC39A2Q9NP94 309 aa4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 PPARGC1AQ9UBK2 798 aaKnown RBP4.03□□□□□ -1.76
HMGB3P2-201ENST00000411913 MATN2O00339 956 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 FOXN1O15353 648 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 CYP27B1O15528 508 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 ETV4P43268 484 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 CRHR2Q13324 411 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 GRM7Q14831 915 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 CCDC142Q17RM4 750 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 LAIR1Q6GTX8 287 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 TMPRSS6Q8IU80 811 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 D2HGDHQ8N465 521 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 UHMK1Q8TAS1 419 aaKnown RBP4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 MICAL1Q8TDZ2 1067 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 NELFAQ9H3P2 528 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 GPR27Q9NS67 375 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 CEP72Q9P209 647 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 DSEQ9UL01 958 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 NPFFR2Q9Y5X5 522 aa4.02□□□□□ -1.77
HMGB3P2-201ENST00000411913 CAPN14A8MX76 684 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 HMGCRP04035 888 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 PDE6AP16499 860 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 KRT4P19013 534 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 KCNQ1P51787 676 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 MRPS21P82921 87 aaKnown RBP4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 NFYCQ13952 458 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 TBR1Q16650 682 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 SLC35F1Q5T1Q4 408 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 C6orf15Q6UXA7 325 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 USP30Q70CQ3 517 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 ADGRE4PQ86SQ3 457 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 C1orf159Q96HA4 380 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 TMEM176AQ96HP8 235 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 MSL2Q9HCI7 577 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 TELO2Q9Y4R8 837 aa4.01□□□□□ -1.77
HMGB3P2-201ENST00000411913 ACOT7O00154 380 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 NKRFO15226 690 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P2-201ENST00000411913 SUSD5O60279 629 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 MSCO60682 206 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 NUDT3O95989 172 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 PEX11BO96011 259 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 LRCH2Q5VUJ6 765 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 USP53Q70EK8 1073 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 KCTD1Q719H9 257 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 FAM178BQ8IXR5 827 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 KCTD13Q8WZ19 329 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 PHF20Q9BVI0 1012 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 ZDHHC5Q9C0B5 715 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 PDGFDQ9GZP0 370 aaPredicted RBP4□□□□□ -1.77
HMGB3P2-201ENST00000411913 ARHGAP28Q9P2N2 729 aa4□□□□□ -1.77
HMGB3P2-201ENST00000411913 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 ZNF16P17020 682 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 GRK2P25098 689 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 GRK3P35626 688 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 ADCY8P40145 1251 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 RBM25P49756 843 aaKnown RBP3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 MEOX1P50221 254 aa3.99□□□□□ -1.77
HMGB3P2-201ENST00000411913 DBPQ10586 325 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms